RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 FBXO45P0C2W1 286 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 ITGA2P17301 1181 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 WT1P19544 449 aaPredicted RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 RRADP55042 308 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 SLC34A1Q06495 639 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 NRF1Q16656 503 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 KLHL26Q53HC5 615 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 NUP54Q7Z3B4 507 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 CMIPQ8IY22 773 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 BRIX1Q8TDN6 353 aaKnown RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 EVA1AQ9H8M9 152 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 AGPAT4Q9NRZ5 378 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 AKAP13Q12802 2813 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 ADRB1P08588 477 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 IQCCQ4KMZ1 466 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 FCRLBQ6BAA4 426 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 DESI1Q6ICB0 168 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 OPN5Q6U736 354 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 DND1Q8IYX4 353 aaKnown RBP21.14■□□□□ 0.97
CPSF4-204ENST00000436336 VANGL1Q8TAA9 524 aaPredicted RBP21.14■□□□□ 0.97
CPSF4-204ENST00000436336 PSMF1Q92530 271 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 TMCO6Q96DC7 493 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 AMBRA1Q9C0C7 1298 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 RLIMQ9NVW2 624 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 DKK4Q9UBT3 224 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 RIMS3Q9UJD0 308 aa21.14■□□□□ 0.97
CPSF4-204ENST00000436336 SERINC4A6NH21 518 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 KLK10O43240 276 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 DEAF1O75398 565 aaPredicted RBP21.13■□□□□ 0.97
CPSF4-204ENST00000436336 CST1P01037 141 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 ADH7P40394 386 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 SSR4P51571 173 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 FBXW4P57775 412 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 ATP6AP1Q15904 470 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 NTRK2Q16620 822 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 HMBOX1Q6NT76 420 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 GRAMD2AQ8IUY3 354 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 SIRT6Q8N6T7 355 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 OR4D11Q8NGI4 311 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 TTC9Q92623 222 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 HGDQ93099 445 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 SPACA9Q96E40 222 aaPredicted RBP21.13■□□□□ 0.97
CPSF4-204ENST00000436336 ZNF300Q96RE9 604 aaPredicted RBP21.13■□□□□ 0.97
CPSF4-204ENST00000436336 LHPPQ9H008 270 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 NDUFAF4Q9P032 175 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 ABCG2Q9UNQ0 655 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 MED13Q9UHV7 2174 aa21.13■□□□□ 0.97
CPSF4-204ENST00000436336 A0A1W2PQD3 144 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 M0R3H8 397 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 CLOCKO15516 846 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 MAN1A2O60476 641 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 LDLRP01130 860 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 PRKAR1AP10644 381 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 SOX3P41225 446 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 MEP1AQ16819 746 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 TSEN54Q7Z6J9 526 aaKnown RBP21.12■□□□□ 0.97
CPSF4-204ENST00000436336 LACC1Q8IV20 430 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 ASB15Q8WXK1 588 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 CCNL2Q96S94 520 aaPredicted RBP21.12■□□□□ 0.97
CPSF4-204ENST00000436336 ZNF347Q96SE7 839 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 WFDC6Q9BQY6 131 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 DNAJB9Q9UBS3 223 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 SLC35A3Q9Y2D2 325 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 ENPP4Q9Y6X5 453 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 ITGA3P26006 1051 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 CDC20Q12834 499 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 SNCBQ16143 134 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 ZNF791Q3KP31 576 aaPredicted RBP21.12■□□□□ 0.97
CPSF4-204ENST00000436336 POGLUT1Q8NBL1 392 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 OR6T1Q8NGN1 323 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 SLC35B4Q969S0 331 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 BDH2Q9BUT1 245 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 POLHQ9Y253 713 aa21.12■□□□□ 0.97
CPSF4-204ENST00000436336 ARGFXA6NJG6 315 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 ALG1L2C9J202 215 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 H3BNH8 94 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 FADS1O60427 444 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 EVI2BP34910 448 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 RNF144AP50876 292 aaPredicted RBP21.11■□□□□ 0.97
CPSF4-204ENST00000436336 RGS8P57771 180 aaPredicted RBP21.11■□□□□ 0.97
CPSF4-204ENST00000436336 SESN3P58005 492 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 ACER2Q5QJU3 275 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 FNDC7Q5VTL7 733 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 B3GNTL1Q67FW5 361 aaPredicted RBP21.11■□□□□ 0.97
CPSF4-204ENST00000436336 APOOLQ6UXV4 268 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 AMIGO2Q86SJ2 522 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 RBM45Q8IUH3 476 aaKnown RBP21.11■□□□□ 0.97
CPSF4-204ENST00000436336 TMEM156Q8N614 296 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 OR5M3Q8NGP4 307 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 CENPNQ96H22 339 aaPredicted RBP21.11■□□□□ 0.97
CPSF4-204ENST00000436336 TBL1XR1Q9BZK7 514 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 STOML1Q9UBI4 398 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 TEKT2Q9UIF3 430 aa21.11■□□□□ 0.97
CPSF4-204ENST00000436336 FAM32AQ9Y421 112 aaKnown RBP21.11■□□□□ 0.97
CPSF4-204ENST00000436336 EML6Q6ZMW3 1958 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 OR6B1O95007 311 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 CSTAP01040 98 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 RHCEP18577 417 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 ENDOUP21128 410 aaKnown RBP21.1■□□□□ 0.97
CPSF4-204ENST00000436336 CLK3P49761 638 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms