RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ADAP2Q9NPF8 381 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 EVA1BQ9NVM1 165 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 MRPS2Q9Y399 296 aaKnown RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 ENTPD2Q9Y5L3 495 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 SPACA6W5XKT8 324 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 F5P12259 2224 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 BRWD1Q9NSI6 2320 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 TRAPPC13A5PLN9 417 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 FAM221BA6H8Z2 402 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 H0YGG7 62 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 FGF17O60258 216 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 PLOD3O60568 738 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 CLEC2LP0C7M8 214 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 SDC2P34741 201 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 CD79BP40259 229 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 ARF3P61204 181 aaPredicted RBP17.29■□□□□ 0.36
CLK1-205ENST00000434813 ACSM1Q08AH1 577 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 HSDL2Q6YN16 418 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 CDRT4Q8N9R6 151 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 BAHD1Q8TBE0 780 aaPredicted RBP17.29■□□□□ 0.36
CLK1-205ENST00000434813 FAM3CQ92520 227 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 STACQ99469 402 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 MIXL1Q9H2W2 232 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 IL21RQ9HBE5 538 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 POT1Q9NUX5 634 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 TOR4AQ9NXH8 423 aa17.29■□□□□ 0.36
CLK1-205ENST00000434813 LRRC72A6NJI9 287 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 C2orf74A8MZ97 194 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 SSX4O60224 188 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 NID1P14543 1247 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 HTR2AP28223 471 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 AKT2P31751 481 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 TPMTP51580 245 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ID2Q02363 134 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ILF3Q12906 894 aaKnown RBP eCLIP17.28■□□□□ 0.361e-7■■■■■ 26.8
CLK1-205ENST00000434813 MAPK14Q16539 360 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 GLYR1Q49A26 553 aaPredicted RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 CRTC2Q53ET0 693 aaPredicted RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 ZMAT1Q5H9K5 638 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ZCCHC12Q6PEW1 402 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ZNF655Q8N720 491 aaPredicted RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 PSD4Q8NDX1 1056 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 OR4F15Q8NGB8 312 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 OR52N1Q8NH53 320 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 RPLP0P6Q8NHW5 317 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 TM9SF2Q99805 663 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 COQ7Q99807 217 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ZNF649Q9BS31 505 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 MUTYHQ9UIF7 546 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ZNF223Q9UK11 482 aaPredicted RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 CBLCQ9ULV8 474 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 GSTK1Q9Y2Q3 226 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 PCDHGB2Q9Y5G2 931 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 TRDV1A0A1B0GX56 115 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 CHST10O43529 356 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 AKAP8O43823 692 aaKnown RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 LALBAP00709 142 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 CASP3P42574 277 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 LSSP48449 732 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 FABP5Q01469 135 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ZNF155Q12901 538 aaPredicted RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 MRPL2Q5T653 305 aaKnown RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 PRSS41Q7RTY9 318 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 LHFPL3Q86UP9 236 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 KLHL36Q8N4N3 616 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 CELF2-AS1Q8N7Q2 184 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 SYT14Q8NB59 555 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 BBS1Q8NFJ9 593 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 AP3S1Q92572 193 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 SAMD8Q96LT4 415 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 KATNB1Q9BVA0 655 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 ABCB9Q9NP78 766 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 HINT3Q9NQE9 182 aaKnown RBP17.28■□□□□ 0.36
CLK1-205ENST00000434813 CLCA2Q9UQC9 943 aa17.28■□□□□ 0.36
CLK1-205ENST00000434813 UNC119BA6NIH7 251 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 CYR61O00622 381 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 LRRTM2O43300 516 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 FMO6PO60774 539 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 LDB3O75112 727 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 GPR75O95800 540 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 AK1P00568 194 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 ZGLP1P0C6A0 271 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 GAAP10253 952 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 PRG2P13727 222 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 SMAD4Q13485 552 aaKnown RBP17.27■□□□□ 0.36
CLK1-205ENST00000434813 EOGTQ5NDL2 527 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 MANEAQ5SRI9 462 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 DDI2Q5TDH0 399 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 RNF113BQ8IZP6 322 aaKnown RBP17.27■□□□□ 0.36
CLK1-205ENST00000434813 COX18Q8N8Q8 333 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 TMEM52Q8NDY8 209 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 IL17RDQ8NFM7 739 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 UBQLN3Q9H347 655 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 RERGLQ9H628 205 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 MAT2BQ9NZL9 334 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 CSNK1G3Q9Y6M4 447 aa17.27■□□□□ 0.36
CLK1-205ENST00000434813 PRUNE2Q8WUY3 3088 aa17.27■□□□□ 0.35
CLK1-205ENST00000434813 A0A0J9YY10 115 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 CDHR4A6H8M9 788 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 DYRK3O43781 588 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms