RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 MED12LQ86YW9 2145 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 SLC22A20A6NK97 555 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 SHISA8B8ZZ34 492 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-213ENST00000434795 HPCAL1P37235 193 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 KIR2DL2P43627 348 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-213ENST00000434795 SERPINB4P48594 390 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 CCT3P49368 545 aaKnown RBP16.1■□□□□ 0.17
CPNE1-213ENST00000434795 PRIM2P49643 509 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 ART1P52961 327 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 OCRLQ01968 901 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 EMX2Q04743 252 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 OR2A2Q6IF42 318 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 BTLAQ7Z6A9 289 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 NATD1Q8N6N6 113 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 FNDC5Q8NAU1 212 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 OTUB1Q96FW1 271 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-213ENST00000434795 DACH2Q96NX9 599 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 BTBD2Q9BX70 525 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 C20orf27Q9GZN8 174 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 PIGUQ9H490 435 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 DUSP22Q9NRW4 184 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 GALNT8Q9NY28 637 aa16.1■□□□□ 0.17
CPNE1-213ENST00000434795 PRRC2AP48634 2157 aaKnown RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 WDR91A4D1P6 747 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 H3BML4 177 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 MSTNO14793 375 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 GMFGO60234 142 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 SKAP2O75563 359 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 G6PDP11413 515 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 PRPS1L1P21108 318 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 PCYT1AP49585 367 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 MPP2Q14168 576 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 LSM12Q3MHD2 195 aaKnown RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 TNFAIP8L3Q5GJ75 292 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 CCNJQ5T5M9 372 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 SZRD1Q7Z422 152 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 P4HA3Q7Z4N8 544 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 ACTRT2Q8TDY3 377 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 NINJ1Q92982 152 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 TUBGCP3Q96CW5 907 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 ZNF845Q96IR2 970 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 STACQ99469 402 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 PRPF18Q99633 342 aaKnown RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 NPAS1Q99742 590 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 KLHDC3Q9BQ90 382 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 PINK1Q9BXM7 581 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 CXorf36Q9H7Y0 433 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 HHATLQ9HCP6 504 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 SSU72Q9NP77 194 aaKnown RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 ZCCHC3Q9NUD5 404 aaKnown RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 CCM2LQ9NUG4 571 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 ST6GALNAC2Q9UJ37 374 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 PACSIN3Q9UKS6 424 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 RAB21Q9UL25 225 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 EIF3LQ9Y262 564 aaKnown RBP16.09■□□□□ 0.17
CPNE1-213ENST00000434795 ZNF175Q9Y473 711 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 SNX8Q9Y5X2 465 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 KCNE3Q9Y6H6 103 aa16.09■□□□□ 0.17
CPNE1-213ENST00000434795 MTORP42345 2549 aa16.08■□□□□ 0.17
CPNE1-213ENST00000434795 SETD2Q9BYW2 2564 aaPredicted RBP16.08■□□□□ 0.17
CPNE1-213ENST00000434795 A0A087WZY1 265 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 BIRC5O15392 142 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 RGS16O15492 202 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-213ENST00000434795 HSPA4LO95757 839 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 C6orf47O95873 294 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 CGAP01215 116 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 DHRS4L1P0CG22 281 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 CD1EP15812 388 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 PSMA4P25789 261 aaKnown RBP16.08■□□□□ 0.16
CPNE1-213ENST00000434795 CLDN8P56748 225 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 C21orf58P58505 322 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 POU6F2P78424 691 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-213ENST00000434795 FAM27E3Q08E93 113 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 LASP1Q14847 261 aaKnown RBP16.08■□□□□ 0.16
CPNE1-213ENST00000434795 SMU1Q2TAY7 513 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 KRT71Q3SY84 523 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 CDC73Q6P1J9 531 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 VWA1Q6PCB0 445 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 ZNF474Q6S9Z5 364 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-213ENST00000434795 GGNQ86UU5 652 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 METTL25Q8N6Q8 603 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 COX18Q8N8Q8 333 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 GATSQ8NAP1 163 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 FNDC9Q8TBE3 224 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 CDS1Q92903 461 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 PGM2Q96G03 612 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 FOXC2Q99958 501 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 ACTRT3Q9BYD9 372 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 BHLHE41Q9C0J9 482 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-213ENST00000434795 CXXC4Q9H2H0 198 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 RNF122Q9H9V4 155 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 ATAD3AQ9NVI7 634 aa16.08■□□□□ 0.16
CPNE1-213ENST00000434795 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-213ENST00000434795 A0A1W2PQD3 144 aa16.07■□□□□ 0.16
CPNE1-213ENST00000434795 SEC14L5O43304 696 aa16.07■□□□□ 0.16
CPNE1-213ENST00000434795 SOX30O94993 753 aa16.07■□□□□ 0.16
CPNE1-213ENST00000434795 SERPINE1P05121 402 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms