RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SOSTQ9BQB4 213 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 DUSP16Q9BY84 665 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 CALHM2Q9HA72 323 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 UTP6Q9NYH9 597 aaKnown RBP4.76□□□□□ -1.65
USP54-206ENST00000433394 EHFQ9NZC4 300 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 SMC3Q9UQE7 1217 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 GSTK1Q9Y2Q3 226 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 STYXL1Q9Y6J8 313 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 PBRM1Q86U86 1689 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 ZSCAN5CA6NGD5 496 aaPredicted RBP4.75□□□□□ -1.65
USP54-206ENST00000433394 G3V3Y1 287 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 OR1F1O43749 312 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 RHBDL1O75783 438 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 TM7SF2O76062 418 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 KBTBD11O94819 623 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 LRATO95237 230 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 PIGRP01833 764 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 HSMCR30P0CW71 290 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 PDHBP11177 359 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 CALB2P22676 271 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 IGFBP5P24593 272 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 CA8P35219 290 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 DHPSP49366 369 aaPredicted RBP4.75□□□□□ -1.65
USP54-206ENST00000433394 PPT1P50897 306 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 PLA2G16P53816 162 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 GPM6BQ13491 265 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 CHI3L2Q15782 390 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 SPATA46Q5T0L3 261 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 TTC23Q5W5X9 447 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 PMF1Q6P1K2 205 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 HIPK1Q86Z02 1210 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 CNPY4Q8N129 248 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 CLDN19Q8N6F1 224 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 OR52M1Q8NGK5 317 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 CNIH3Q8TBE1 160 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 AENQ8WTP8 325 aaKnown RBP4.75□□□□□ -1.65
USP54-206ENST00000433394 ITLN1Q8WWA0 313 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 C18orf25Q96B23 403 aaPredicted RBP4.75□□□□□ -1.65
USP54-206ENST00000433394 C7orf34Q96L11 122 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 HCAR1Q9BXC0 346 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 PUS3Q9BZE2 481 aaKnown RBP4.75□□□□□ -1.65
USP54-206ENST00000433394 GLT8D2Q9H1C3 349 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 LRRC40Q9H9A6 602 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 NANSQ9NR45 359 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 GNG12Q9UBI6 72 aa4.75□□□□□ -1.65
USP54-206ENST00000433394 EIF4G3O43432 1585 aaKnown RBP4.74□□□□□ -1.65
USP54-206ENST00000433394 ZSCAN12O43309 604 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 RIPK2O43353 540 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 RENP00797 406 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 OPN1LWP04000 364 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 MELTFP08582 738 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 FAM200BP0CF97 657 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 DBTP11182 482 aaKnown RBP4.74□□□□□ -1.65
USP54-206ENST00000433394 NF2P35240 595 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 HMGCLP35914 325 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 POU3F4P49335 361 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 AP3M2P53677 418 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 SLC8A3P57103 927 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 RND3P61587 244 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 NCBP1Q09161 790 aaKnown RBP4.74□□□□□ -1.65
USP54-206ENST00000433394 PEX6Q13608 980 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 FCN2Q15485 313 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 LTB4RQ15722 352 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ATF7IP2Q5U623 682 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ZNF343Q6P1L6 599 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 GCNT7Q6ZNI0 430 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 PRSS48Q7RTY5 328 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 C16orf62Q7Z3J2 963 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 KIAA1328Q86T90 577 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 CCDC50Q8IVM0 306 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ZNF683Q8IZ20 524 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 POM121L12Q8N7R1 296 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 STEAP2Q8NFT2 490 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 CASD1Q96PB1 797 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 OR5M11Q96RB7 305 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 MCCC1Q96RQ3 725 aaPredicted RBP4.74□□□□□ -1.65
USP54-206ENST00000433394 MYCBPQ99417 103 aaPredicted RBP4.74□□□□□ -1.65
USP54-206ENST00000433394 RIT2Q99578 217 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ZSCAN5AQ9BUG6 496 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ELOVL4Q9GZR5 314 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 OPN3Q9H1Y3 402 aaPredicted RBP4.74□□□□□ -1.65
USP54-206ENST00000433394 ELOVL3Q9HB03 270 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 DPM3Q9P2X0 92 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ANAPC7Q9UJX3 599 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 KLK13Q9UKR3 277 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ALG6Q9Y672 507 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 ADAMTS12P58397 1594 aa4.74□□□□□ -1.65
USP54-206ENST00000433394 EFCAB5A4FU69 1503 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 NPIPA7E9PJI5 369 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 OPN1MWP04001 364 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 NPIPA8P0DM63 369 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 OPN1MW2P0DN77 364 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 OPN1MW3P0DN78 364 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 TBXA2RP21731 343 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 CDH5P33151 784 aaPredicted RBP4.73□□□□□ -1.65
USP54-206ENST00000433394 MAGEA9P43362 315 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 PRELPP51888 382 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 ARFIP1P53367 373 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 CNTN2Q02246 1040 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 RIPPLY1Q0D2K3 151 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms