RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ARHGEF39Q8N4T4 335 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SPIN2AQ99865 258 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SPIN2BQ9BPZ2 258 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MAP10Q9P2G4 905 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 LAMP3Q9UQV4 416 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TIMM13Q9Y5L4 95 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NPIPA5A0A0B4J1W7 369 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SNRPGP15A8MWD9 76 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 E9PI62 339 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TGM5O43548 720 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 LINGO3P0C6S8 592 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 GNALP38405 381 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ADH7P40394 386 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF267Q14586 743 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PLA1AQ53H76 456 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 KLHL24Q6TFL4 600 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 LAYNQ6UX15 382 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SLC46A3Q7Z3Q1 461 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ATCAYQ86WG3 371 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SYT14Q8NB59 555 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR52B6Q8NGF0 335 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR52H1Q8NGJ2 320 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SNX33Q8WV41 574 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MRPS24Q96EL2 167 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 UQCC2Q9BRT2 126 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TBL1XR1Q9BZK7 514 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 C1orf198Q9H425 327 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ERVMER34-1Q9H9K5 563 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ADAP2Q9NPF8 381 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MRPS18AQ9NVS2 196 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MAP4K5Q9Y4K4 846 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PLXNB3Q9ULL4 1909 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 BEST1O76090 585 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR6B1O95007 311 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 PDYNP01213 254 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CTSEP14091 401 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CTHP32929 405 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF41P51814 821 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 DLX5P56178 289 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RACK1P63244 317 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 HSD11B2P80365 405 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 LSMEM1Q8N8F7 131 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 NUBPLQ8TB37 319 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 COX14Q96I36 57 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZSWIM3Q96MP5 696 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MUS81Q96NY9 551 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FKBP14Q9NWM8 211 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RNF24Q9Y225 148 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 A0A1W2PQD3 144 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ANTXRLA6NF34 631 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FTCDNL1E5RQL4 147 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CDK2P24941 298 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR4D2P58180 307 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 DUSP8Q13202 625 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CDK5R2Q13319 367 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GANABQ14697 944 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM30BQ3MIR4 351 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 C1orf94Q6P1W5 598 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 Q6ZSR9 355 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ETFBKMTQ8IXQ9 262 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 PIANPQ8IYJ0 282 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 EFCAB3Q8N7B9 438 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 NLGN2Q8NFZ4 835 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR6M1Q8NGM8 313 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SMIM4Q8WVI0 70 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RFT1Q96AA3 541 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SLC38A3Q99624 504 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 PKP2Q99959 881 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR51E2Q9H255 320 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 IFT46Q9NQC8 304 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 PARPBPQ9NWS1 579 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GALPQ9UBC7 116 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SLC22A14Q9Y267 594 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FASNP49327 2511 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RFPL2O75678 378 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SYPP08247 313 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 NME1P15531 152 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TAL1P17542 331 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 PMELP40967 661 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GSSP48637 474 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 UFM1P61960 85 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GPM6BQ13491 265 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZC3H14Q6PJT7 736 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GAREM2Q75VX8 874 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CFAP206Q8IYR0 622 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SPEM1Q8N4L4 309 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 KCNG3Q8TAE7 436 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 NDNFQ8TB73 568 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FUNDC2Q9BWH2 189 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FGF20Q9NP95 211 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 UBQLN4Q9NRR5 601 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FAM86C1Q9NVL1 165 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FBXL12Q9NXK8 326 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ERVK-11Q9UQG0 969 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TRIM43BA6NCK2 446 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RNF212BA8MTL3 300 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR1F1O43749 312 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 BCAS1O75363 584 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CCNKO75909 580 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CHRM2P08172 466 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms