RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MAP3K8P41279 467 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 POLR2JP52435 117 aaKnown RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 GAS1P54826 345 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 PER3P56645 1201 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 C21orf58P58505 322 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 RAC1P63000 192 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 POU6F2P78424 691 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 ADORA2A-AS1P86434 159 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 GUCY1A3Q02108 690 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 PMPCAQ10713 525 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 SNTA1Q13424 505 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 GPR68Q15743 365 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 GSTA3Q16772 222 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 PDCD4Q53EL6 469 aaKnown RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 RPS26P11Q5JNZ5 115 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 WLSQ5T9L3 541 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 CDC73Q6P1J9 531 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 TNFAIP8L2Q6P589 184 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 ZCCHC12Q6PEW1 402 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 APOOLQ6UXV4 268 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 Q6ZPB1 254 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 CAMKMTQ7Z624 323 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 HMGN2P46Q86SG4 172 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 PLCZ1Q86YW0 608 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 LRRC34Q8IZ02 419 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 MIER2Q8N344 545 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 RPRMLQ8N4K4 120 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 ZNF614Q8N883 585 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 FAM83FQ8NEG4 500 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 OR4K17Q8NGC6 315 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 OR56A1Q8NGH5 318 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 NEIL3Q8TAT5 605 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 FAM110BQ8TC76 370 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 PNPT1Q8TCS8 783 aaKnown RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 VPS33AQ96AX1 596 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 TESCQ96BS2 214 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 SH3YL1Q96HL8 342 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 SLC35G5Q96KT7 338 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 PSMG3-AS1Q96PY0 264 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 TIMP4Q99727 224 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 SLC35A5Q9BS91 424 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 G6PC3Q9BUM1 346 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 BTBD2Q9BX70 525 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 TBL1XR1Q9BZK7 514 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 OR51I1Q9H343 314 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 SERHL2Q9H4I8 314 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 ZNF703Q9H7S9 590 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 ACKR4Q9NPB9 350 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 TCF7L2Q9NQB0 619 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 GPATCH2Q9NW75 528 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 CCDC167Q9P0B6 97 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 NTMQ9P121 344 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 SUCOQ9UBS9 1254 aaKnown RBP5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 BTNL2Q9UIR0 455 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 DKKL1Q9UK85 242 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 MKLN1Q9UL63 735 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 C15orf41Q9Y2V0 281 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 WIF1Q9Y5W5 379 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 ATMQ13315 3056 aa5.25□□□□□ -1.57
HMGB3P24-201ENST00000433260 MYO7BQ6PIF6 2116 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 SVILO95425 2214 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 A0A0G2JND7 137 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 A0A1B0GVC2 190 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 TTC36A6NLP5 189 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 DUXAA6NLW8 204 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 KDM4EB2RXH2 506 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 B4DXG7 233 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 GTPBP1O00178 669 aaKnown RBP5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 SCDO00767 359 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 AQP7O14520 342 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 ADAM10O14672 748 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 BCKDKO14874 412 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 ZIC3O60481 467 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 FCMRO60667 390 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 HCN1O60741 890 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 EDF1O60869 148 aaKnown RBP5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 TGDSO95455 350 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 OXSR1O95747 527 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 IL6P05231 212 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 VIMP08670 466 aaKnown RBP5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 IFI6P09912 130 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 ATP6V1C1P21283 382 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 TBXA2RP21731 343 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 VAMP1P23763 118 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 ELAVL4P26378 380 aaKnown RBP5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 DPP4P27487 766 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 ZFP36L2P47974 494 aaKnown RBP5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 SMSP52788 366 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 NUP107P57740 925 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 STX1BP61266 288 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 PSPHP78330 225 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 C17orf67Q0P5P2 114 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 CDSNQ15517 529 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 DPY19L1Q2PZI1 675 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 FLYWCH1Q4VC44 716 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 TIGD2Q4W5G0 525 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 GPAT3Q53EU6 434 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 AGKQ53H12 422 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 C6orf10Q5SRN2 563 aa5.24□□□□□ -1.57
HMGB3P24-201ENST00000433260 DCST1Q5T197 706 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms