RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 OR10D3Q8NH80 312 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 PPCDCQ96CD2 204 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 RNF145Q96MT1 663 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 TAS2R7Q9NYW3 318 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 ARID1AO14497 2285 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 EMC8O43402 210 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 OIP5O43482 229 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 NDUFB5O43674 189 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 NID1P14543 1247 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 KRT4P19013 534 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 LOXP28300 417 aaPredicted RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 NR1H2P55055 460 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 MANFP55145 182 aaKnown RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 EEFSECP57772 596 aaKnown RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 SLC18A2Q05940 514 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 GANABQ14697 944 aaKnown RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 CD226Q15762 336 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 CTU2Q2VPK5 515 aaKnown RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 NDUFAF6Q330K2 333 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 YTHDF3Q7Z739 585 aaKnown RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 BIVMQ86UB2 503 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 METTL25Q8N6Q8 603 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 ATP6V1C2Q8NEY4 427 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 OR2W6PQ8NHA6 318 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 ROBO4Q8WZ75 1007 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 CCDC126Q96EE4 140 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 GIMAP5Q96F15 307 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 SLC39A3Q9BRY0 314 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 MECRQ9BV79 373 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 GATA5Q9BWX5 397 aaPredicted RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 OXSMQ9NWU1 459 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 C1orf109Q9NX04 203 aa12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 MRTO4Q9UKD2 239 aaKnown RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 RAI1Q7Z5J4 1906 aaPredicted RBP12.77□□□□□ -0.36
SMARCE1-205ENST00000431889 COPEO14579 308 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 KCNK2O95069 426 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 CRHP06850 196 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 SFTPDP35247 375 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 GSTM5P46439 218 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 RPS3AP61247 264 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 PRR5P85299 388 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 PCLAFQ15004 111 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 GUSBP1Q15486 140 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 TMEM44Q2T9K0 475 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 WFDC8Q8IUA0 241 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 DDIASQ8IXT1 998 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 POC1BQ8TC44 478 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 ZBTB9Q96C00 473 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 DTNBP1Q96EV8 351 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 MARK4Q96L34 752 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 REEP4Q9H6H4 257 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 SNX8Q9Y5X2 465 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 AP4B1Q9Y6B7 739 aa12.77□□□□□ -0.37
SMARCE1-205ENST00000431889 ZANQ9Y493 2812 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 A0A0J9YW62 118 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 A0A1W2PRB8 838 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 TLDC2A0PJX2 215 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 SLC28A1O00337 649 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 AZIN1O14977 448 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 RGS14O43566 566 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 NKX2-2O95096 273 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 TBXA2RP21731 343 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 PRIM2P49643 509 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 PSMD4P55036 377 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 CTBP2P56545 445 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 DNAJB13P59910 316 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 CCDC153Q494R4 210 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 LIPMQ5VYY2 423 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 MFSD12Q6NUT3 480 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 ZCCHC23Q6ZST2 131 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 IKBIPQ70UQ0 350 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF619Q8N2I2 560 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 KIF18AQ8NI77 898 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 PPP1R14CQ8TAE6 165 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 FAM76AQ8TAV0 307 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 CDS1Q92903 461 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 C3orf14Q9HBI5 128 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 MED17Q9NVC6 651 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 ELOVL5Q9NYP7 299 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF175Q9Y473 711 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 KCNE3Q9Y6H6 103 aa12.76□□□□□ -0.37
SMARCE1-205ENST00000431889 SPAG7O75391 227 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 CD8BP10966 210 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 CRHR1P34998 444 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 MAP3K8P41279 467 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 CCT5P48643 541 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 EEF1A1P68104 462 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 PSPHP78330 225 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 LASP1Q14847 261 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 PLPPR5Q32ZL2 321 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 EEF1A1P5Q5VTE0 462 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 SHEQ5VZ18 495 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 STAC2Q6ZMT1 411 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 OLIG3Q7RTU3 272 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms