RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 JADE3Q92613 823 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 PPCDCQ96CD2 204 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 ARSGQ96EG1 525 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 CHMP6Q96FZ7 201 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 RNF145Q96MT1 663 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 TSSK3Q96PN8 268 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 LRTM1Q9HBL6 345 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 MCTS1Q9ULC4 181 aaKnown RBP12.47□□□□□ -0.41
SEC13-211ENST00000431352 JMJD1CQ15652 2540 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 PCNX3Q9H6A9 2034 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 IGLV3-32A0A0A0MS00 114 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 TNFSF11O14788 317 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 CXCL13O43927 109 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 PLIN3O60664 434 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 OXSR1O95747 527 aaPredicted RBP12.46□□□□□ -0.41
SEC13-211ENST00000431352 UROSP10746 265 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 ZNF17P17021 662 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 ZNF41P51814 821 aaPredicted RBP12.46□□□□□ -0.41
SEC13-211ENST00000431352 RPL38P63173 70 aaKnown RBP12.46□□□□□ -0.41
SEC13-211ENST00000431352 TMEM44Q2T9K0 475 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 VPS26BQ4G0F5 336 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 BEX5Q5H9J7 111 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 CCNJQ5T5M9 372 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 WDR75Q8IWA0 830 aaKnown RBP12.46□□□□□ -0.41
SEC13-211ENST00000431352 NUP43Q8NFH3 380 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 OR6K3Q8NGY3 331 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 OR2T11Q8NH01 316 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 OR4C3Q8NH37 302 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 ZFP28Q8NHY6 868 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 CAVIN3Q969G5 261 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 GMPPAQ96IJ6 420 aaPredicted RBP12.46□□□□□ -0.41
SEC13-211ENST00000431352 MS4A4EQ96PG1 132 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 KLHDC3Q9BQ90 382 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 BDH2Q9BUT1 245 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 C12orf49Q9H741 205 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 C1orf109Q9NX04 203 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 SH3BP4Q9P0V3 963 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 STOML1Q9UBI4 398 aa12.46□□□□□ -0.41
SEC13-211ENST00000431352 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
SEC13-211ENST00000431352 TLN2Q9Y4G6 2542 aa12.46□□□□□ -0.42
SEC13-211ENST00000431352 A0A1W2PRB8 838 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 TTC36A6NLP5 189 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 H3BQF6 201 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 RGS14O43566 566 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
SEC13-211ENST00000431352 NKX2-2O95096 273 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 PLAUP00749 431 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 HPGDP15428 266 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 SDC1P18827 310 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 ME2P23368 584 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 SFTPDP35247 375 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 PTH2RP49190 550 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 MANFP55145 182 aaKnown RBP12.45□□□□□ -0.42
SEC13-211ENST00000431352 SLC18A2Q05940 514 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 DUSP5Q16690 384 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC13-211ENST00000431352 CTU2Q2VPK5 515 aaKnown RBP12.45□□□□□ -0.42
SEC13-211ENST00000431352 PLPPR5Q32ZL2 321 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 GALNTL6Q49A17 601 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 HBMQ6B0K9 141 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 ZNF704Q6ZNC4 412 aaPredicted RBP12.45□□□□□ -0.42
SEC13-211ENST00000431352 PLEKHM3Q6ZWE6 761 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 GTPBP8Q8N3Z3 284 aaPredicted RBP12.45□□□□□ -0.42
SEC13-211ENST00000431352 COX18Q8N8Q8 333 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 CDRT4Q8N9R6 151 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 SLC16A11Q8NCK7 471 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 OR2V1Q8NHB1 315 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 ZBED6CLQ96FA7 236 aaPredicted RBP12.45□□□□□ -0.42
SEC13-211ENST00000431352 PLPPR2Q96GM1 343 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 C16orf58Q96GQ5 468 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 CCT7Q99832 543 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 ACTR6Q9GZN1 396 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 REEP4Q9H6H4 257 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 MED17Q9NVC6 651 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 FBXO34Q9NWN3 711 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 BAIAP2L1Q9UHR4 511 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 CCL27Q9Y4X3 112 aa12.45□□□□□ -0.42
SEC13-211ENST00000431352 ROS1P08922 2347 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 A0A087WZY1 265 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 A0A0J9YW62 118 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 SLC28A1O00337 649 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 COPEO14579 308 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 KCNK2O95069 426 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 SHBGP04278 402 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 LINC00032P0C843 101 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 CPA3P15088 417 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 IL11P20809 199 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 SHC1P29353 583 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 DNAJB13P59910 316 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 NAA20P61599 178 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 OCRLQ01968 901 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 KIAA0040Q15053 153 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 CD226Q15762 336 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 CCDC153Q494R4 210 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 MFSD12Q6NUT3 480 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 STAC2Q6ZMT1 411 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 STK32CQ86UX6 486 aa12.44□□□□□ -0.42
SEC13-211ENST00000431352 CEP70Q8NHQ1 597 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms