RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RSRP1Q9BUV0 290 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ULBP2Q9BZM5 246 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 SIRPDQ9H106 197 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 RPF2Q9H7B2 306 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 NPDC1Q9NQX5 325 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ALKBH4Q9NXW9 302 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CDH22Q9UJ99 828 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 LHX6Q9UPM6 363 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 UFC1Q9Y3C8 167 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM200CA6NKL6 621 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 H3BML4 177 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TPST1O60507 370 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TUSC2O75896 110 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 OR2F2O95006 317 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 IQCF3P0C7M6 154 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CALCRP30988 508 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 OR3A1P47881 315 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 GPR143P51810 404 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 HMGCS2P54868 508 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MRPS11P82912 194 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 GRM2Q14416 872 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 PDLIM3Q53GG5 364 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 EPHA10Q5JZY3 1008 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 FRMPD2BQ6IN97 320 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ESRP1Q6NXG1 681 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ATG4DQ86TL0 474 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CCDC190Q86UF4 302 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 FAM35AQ86V20 835 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 LRP11Q86VZ4 500 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 COMMD2Q86X83 199 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF547Q8IVP9 402 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 GJD3Q8N144 294 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 DNAAF1Q8NEP3 725 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MCFD2Q8NI22 146 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZFP90Q8TF47 636 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ASB17Q8WXJ9 295 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CXorf40BQ96DE9 158 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TIMP4Q99727 224 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ADI1Q9BV57 179 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 SIK2Q9H0K1 926 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM160Q9NX00 188 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 GAR1Q9NY12 217 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 LRIT1Q9P2V4 623 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 OR14J1Q9UGF5 321 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 USP3Q9Y6I4 520 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MYH7BA7E2Y1 1941 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MYH7P12883 1935 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CTTNBP2Q8WZ74 1663 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF816-ZNF321PA0A0X1KG74 233 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CCDC195A0A1B0GUA6 201 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 A0A1W2PQU0 124 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MROH6A6NGR9 719 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 FAM170BA6NMN3 283 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 C9JVG2 144 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MAN2B1O00754 1011 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZMPSTE24O75844 475 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 SEC14L2O76054 403 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 THP07101 528 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 RHOCP08134 193 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MAPTP10636 758 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TSPAN8P19075 237 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 S1PR1P21453 382 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 S100A11P31949 105 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 BRCC3P46736 316 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 KLK7P49862 253 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 PNLIPRP2P54317 469 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 EMP2P54851 167 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MAB21L1Q13394 359 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 SMN1Q16637 294 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 FIGLAQ6QHK4 219 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CXXC5Q7LFL8 322 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TSPAN33Q86UF1 283 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF100Q8IYN0 542 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF444Q8N0Y2 327 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 Q8N402 240 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CCDC24Q8N4L8 307 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 PI4KAP1Q8N8J0 262 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 OR6F1Q8NGZ6 308 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZFAND1Q8TCF1 268 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF775Q96BV0 537 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 SFRP2Q96HF1 295 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF599Q96NL3 588 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 SLC38A2Q96QD8 506 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM175Q9BSA9 504 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM121Q9BTD3 319 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM43Q9BTV4 400 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ABHD16BQ9H3Z7 469 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CSNK1G1Q9HCP0 422 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 RALYQ9UKM9 306 aaKnown RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CLDN16Q9Y5I7 305 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 STRCQ7RTU9 1775 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 CAMSAP2Q08AD1 1489 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 KDM4EB2RXH2 506 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 AIPO00170 330 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SYT5O00445 386 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 MANBAO00462 879 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 AIREO43918 545 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PRKYO43930 277 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TYMSP04818 313 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SERPIND1P05546 499 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms