RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 OR5P2Q8WZ92 322 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
SMPD4-204ENST00000430682 WNT2BQ93097 391 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 PGM2Q96G03 612 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 ZNF845Q96IR2 970 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-204ENST00000430682 C3orf14Q9HBI5 128 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 KCNK9Q9NPC2 374 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 ASIC5Q9NY37 505 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 HAO1Q9UJM8 370 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 RAP2CQ9Y3L5 183 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 SNX8Q9Y5X2 465 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 NF1P21359 2839 aa11.29□□□□□ -0.6
SMPD4-204ENST00000430682 ZFHX3Q15911 3703 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 FAM221AA4D161 298 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 TTC36A6NLP5 189 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 TM9SF1O15321 606 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 SCN2BO60939 215 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 CTAG2O75638 210 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 TNFSF13O75888 250 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 NGFRP08138 427 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 ALOX5P09917 674 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 PRPS1L1P21108 318 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 PSMA4P25789 261 aaKnown RBP11.28□□□□□ -0.6
SMPD4-204ENST00000430682 KIR2DL3P43628 341 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 C21orf58P58505 322 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 RPS26P62854 115 aaKnown RBP11.28□□□□□ -0.6
SMPD4-204ENST00000430682 C17orf67Q0P5P2 114 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 TP53BP2Q13625 1128 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 BCL2A1Q16548 175 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 PGS1Q32NB8 556 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMPD4-204ENST00000430682 CDC73Q6P1J9 531 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 GGNQ86UU5 652 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 COX18Q8N8Q8 333 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 ANKRD42Q8N9B4 389 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 PPP1R14CQ8TAE6 165 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 POC1BQ8TC44 478 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 JADE3Q92613 823 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 SH3YL1Q96HL8 342 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-204ENST00000430682 DUSP26Q9BV47 211 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 BTBD2Q9BX70 525 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 NUF2Q9BZD4 464 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 TBL1XR1Q9BZK7 514 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 PIGUQ9H490 435 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 SDHAF3Q9NRP4 125 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 GIN1Q9NXP7 522 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 VDAC3Q9Y277 283 aa11.28□□□□□ -0.6
SMPD4-204ENST00000430682 FLNAP21333 2647 aaKnown RBP11.28□□□□□ -0.6
SMPD4-204ENST00000430682 EEF1E1-BLOC1S5C9J1V9 151 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 NPIPB9F8W1W9 429 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 H3BML4 177 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 SEC14L5O43304 696 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 EEF1E1O43324 174 aaKnown RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 NDUFB5O43674 189 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 EFNA2O43921 213 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 ZWINTO95229 277 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 IL18BPO95998 194 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 OPN1LWP04000 364 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 ALDOCP09972 364 aaKnown RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 PEPDP12955 493 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 CAPN3P20807 821 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 IL11P20809 199 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 OPRM1P35372 400 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 GCKP35557 465 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 PRIM2P49643 509 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 RPL14P50914 215 aaKnown RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 PSMD4P55036 377 aaKnown RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 CASP9P55211 416 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 POU6F2P78424 691 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 SF3B4Q15427 424 aaKnown RBP eCLIP11.27□□□□□ -0.616e-11■■■■■ 52.3
SMPD4-204ENST00000430682 NDUFAF6Q330K2 333 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 VPS26BQ4G0F5 336 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 ZCCHC12Q6PEW1 402 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 CAMKMTQ7Z624 323 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 LUZP2Q86TE4 346 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 TMEM200AQ86VY9 491 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 OR5D16Q8NGK9 328 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 ARSGQ96EG1 525 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 TEX37Q96LM6 180 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 STACQ99469 402 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 TM9SF2Q99805 663 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 GPATCH1Q9BRR8 931 aaKnown RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 ACTRT3Q9BYD9 372 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 BHLHE41Q9C0J9 482 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 DUSP22Q9NRW4 184 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 KCNE5Q9UJ90 142 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 MRTO4Q9UKD2 239 aaKnown RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 EIF3LQ9Y262 564 aaKnown RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 ACTL7BQ9Y614 415 aa11.27□□□□□ -0.61
SMPD4-204ENST00000430682 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.61
SMPD4-204ENST00000430682 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
SMPD4-204ENST00000430682 A0A1W2PNV4 684 aa11.26□□□□□ -0.61
SMPD4-204ENST00000430682 TMEM120BA0PK00 339 aa11.26□□□□□ -0.61
SMPD4-204ENST00000430682 C9JVG2 144 aa11.26□□□□□ -0.61
SMPD4-204ENST00000430682 SDHDO14521 159 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms