RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 CPB2Q96IY4 423 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 VPS39Q96JC1 886 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 IL17FQ96PD4 163 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 MTMR9Q96QG7 549 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 PANX2Q96RD6 677 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 GPA33Q99795 319 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 SSX3Q99909 188 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 DHRS9Q9BPW9 319 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 CCM2Q9BSQ5 444 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 DHX33Q9H6R0 707 aaKnown RBP3.63□□□□□ -1.83
HMGB3-203ENST00000430118 EVA1AQ9H8M9 152 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 PANK4Q9NVE7 773 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 GID8Q9NWU2 228 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 C2orf42Q9NWW7 574 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 MALT1Q9UDY8 824 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 TBK1Q9UHD2 729 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 ELF5Q9UKW6 265 aaPredicted RBP3.63□□□□□ -1.83
HMGB3-203ENST00000430118 EXOC7Q9UPT5 735 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 CHMP2BQ9UQN3 213 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 UNC79Q9P2D8 2635 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 TENM4Q6N022 2769 aa3.63□□□□□ -1.83
HMGB3-203ENST00000430118 VWA8A3KMH1 1905 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 A0A1B0GWJ7 208 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SH3PXD2BA1X283 911 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 GMNCA6NCL1 334 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SERINC4A6NH21 518 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 NKX6-3A6NJ46 265 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CCT8L1PA6NM43 557 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 OR5K4A6NMS3 321 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CCDC169A6NNP5 214 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CYSRT1A8MQ03 144 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 MEI4A8MW99 385 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 E7EWF7 191 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 FBP2O00757 339 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 MCF2LO15068 1137 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ALOX15BO15296 676 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ADAM12O43184 909 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SYT7O43581 403 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 KLHL2O95198 593 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 STBD1O95210 358 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 OXSR1O95747 527 aaPredicted RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ATP1B1P05026 303 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ACAA1P09110 424 aaPredicted RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 GOT1P17174 413 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 BCKDHBP21953 392 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CFL1P23528 166 aaKnown RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ANXA13P27216 316 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 YWHABP31946 246 aaKnown RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 RPL9P32969 192 aaKnown RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 DUTP33316 252 aaKnown RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 PHBP35232 272 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 PCK1P35558 622 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 TRIM23P36406 574 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 PTGER3P43115 390 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CBX5P45973 191 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 TUFMP49411 452 aaKnown RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CCR4P51679 360 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ART1P52961 327 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 AP3M2P53677 418 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CDH11P55287 796 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 KCNK10P57789 538 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 S100A12P80511 92 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SEMG2Q02383 582 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 GBE1Q04446 702 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF33AQ06730 810 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 BNIP1Q12981 228 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SGCGQ13326 291 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SQLEQ14534 574 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 MTF1Q14872 753 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 UPP1Q16831 310 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 PARP6Q2NL67 630 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 WSCD2Q2TBF2 565 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 GPR33Q49SQ1 333 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 FGD3Q5JSP0 725 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 LCN1P1Q5VSP4 162 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 PRAMEF7Q5VXH5 474 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 NKAIN2Q5VXU1 208 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 CES4AQ5XG92 561 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF776Q68DI1 518 aaPredicted RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 DHRS4L2Q6PKH6 230 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 AFTPHQ6ULP2 937 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 WDR88Q6ZMY6 472 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ISCA2Q86U28 154 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 NFE4Q86UQ8 179 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SPATA24Q86W54 205 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SPATA2LQ8IUW3 424 aaPredicted RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ZBED8Q8IZ13 594 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF248Q8NDW4 579 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 DDHD1Q8NEL9 900 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 OR4A16Q8NH70 328 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 OLIG1Q8TAK6 271 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SECTM1Q8WVN6 248 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 DNAJC9Q8WXX5 260 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 SORCS1Q8WY21 1168 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 MRPS31Q92665 395 aaKnown RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 TMEM143Q96AN5 459 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 MED8Q96G25 268 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 LURAP1Q96LR2 239 aa3.62□□□□□ -1.83
HMGB3-203ENST00000430118 RPRD1AQ96P16 312 aaPredicted RBP3.62□□□□□ -1.83
HMGB3-203ENST00000430118 S1PR3Q99500 378 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms