RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PRR23CQ6ZRP0 262 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 IKBIPQ70UQ0 350 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 SYT9Q86SS6 491 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 IZUMO1Q8IYV9 350 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 NANOGP1Q8N7R0 232 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 YIPF7Q8N8F6 280 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 COX18Q8N8Q8 333 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 SLC16A11Q8NCK7 471 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 OR6C4Q8NGE1 309 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 OR6K6Q8NGW6 343 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 TMEM255BQ8WV15 326 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 TM9SF4Q92544 642 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 CDS1Q92903 461 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 OR2B2Q9GZK3 357 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ABCG5Q9H222 651 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 WSB2Q9NYS7 404 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 LOC105369274A0A096LPK9 316 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 HYKKA2RU49 373 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 PRR23D1E9PI22 279 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 PRODHO43272 600 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 AIFM1O95831 613 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 PRR23D2P0DMB1 279 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 APEHP13798 732 aaKnown RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 BSGP35613 385 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 ENTPD8Q5MY95 495 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 BCL2L15Q5TBC7 163 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 LCTLQ6UWM7 567 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 LUZP2Q86TE4 346 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 UBQLNLQ8IYU4 475 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 OR4N4Q8N0Y3 316 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 VWA5B2Q8N398 1253 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 SUN3Q8TAQ9 357 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CAMK1GQ96NX5 476 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 LRRC3BQ96PB8 259 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 OR7D2Q96RA2 312 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 MED28Q9H204 178 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CHST8Q9H2A9 424 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 C6orf106Q9H6K1 298 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 SEMA4GQ9NTN9 838 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 NLGN3Q9NZ94 848 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 NFKBIL1Q9UBC1 381 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 PPIL1Q9Y3C6 166 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CABIN1Q9Y6J0 2220 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 FAM171A2A8MVW0 826 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 ORC5O43913 435 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 VEGFDO43915 354 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 OR10H2O60403 315 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 SOX30O94993 753 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CSF3P09919 207 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 POLR2CP19387 275 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 GSTM3P21266 225 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 DRD5P21918 477 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 ITGB7P26010 798 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CMPK1P30085 196 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CRYBB2P43320 205 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CSNK1G2P78368 415 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 ACY1Q03154 408 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CDC20Q12834 499 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 DSG2Q14126 1118 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 DOC2BQ14184 412 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 SAXO2Q658L1 398 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 RNF165Q6ZSG1 346 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CXXC5Q7LFL8 322 aaKnown RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 ATCAYQ86WG3 371 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 NRSN1Q8IZ57 195 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 LRRC17Q8N6Y2 441 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 OR52E1Q8NGJ3 308 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 METTL2AQ96IZ6 378 aaKnown RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 LRIG1Q96JA1 1093 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 KATNB1Q9BVA0 655 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 SRMSQ9H3Y6 488 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 DPEP2Q9H4A9 486 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 GALNT9Q9HCQ5 603 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 STARD5Q9NSY2 213 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 SPHK1Q9NYA1 384 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 A0A1W2PR48 441 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 OTOL1A6NHN0 477 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 LYRM1O43325 122 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CHST10O43529 356 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 B4GALT2O60909 372 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 SLC35G6P0C7Q6 338 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 PEPDP12955 493 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 HIST1H1TP22492 207 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 TLX1P31314 330 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 BCL6P41182 706 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 SLC1A3P43003 542 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 RAB28P51157 221 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 PCBP3P57721 371 aaKnown RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 RGS1Q08116 209 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 HYAL4Q2M3T9 481 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 RPTNQ6XPR3 784 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CEACAM19Q7Z692 300 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 NOXA1Q86UR1 476 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 OR5K2Q8NHB8 316 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 GNPDA2Q8TDQ7 276 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 PRRC1Q96M27 445 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 C19orf43Q9BQ61 176 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 PCBD2Q9H0N5 130 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms