RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 TMEM159Q96B96 161 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 MAPKAP1Q9BPZ7 522 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 EDEM2Q9BV94 578 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZBP1Q9H171 429 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLC25A32Q9H2D1 315 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 DUSP22Q9NRW4 184 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZDHHC3Q9NYG2 299 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 A0A1B0GWJ7 208 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 M0R036 132 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR1I1O60431 355 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 PRAF2O60831 178 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 CLN5O75503 358 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 UBE2IP63279 158 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 BOP1Q14137 746 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 LIN54Q6MZP7 749 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZNF574Q6ZN55 896 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 PGBD5Q8N414 524 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 CELF5Q8N6W0 485 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 TMEM163Q8TC26 289 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SUCNR1Q9BXA5 334 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SEMA4CQ9C0C4 833 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 NKX2-4Q9H2Z4 354 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 CLMPQ9H6B4 373 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 TMEM30AQ9NV96 361 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 FAM86C1Q9NVL1 165 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 H2AFY2Q9P0M6 372 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 LATS1O95835 1130 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 IFNA17P01571 189 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 NDUFB7P17568 137 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 PTBP1P26599 531 aaKnown RBP eCLIP13.58□□□□□ -0.243e-11■■■■□ 26
SYNGAP1-203ENST00000428982 ACVR2AP27037 513 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 GNALP38405 381 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 PITPNBP48739 271 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 CCR6P51684 374 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 NDUFAF6Q330K2 333 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 XKR6Q5GH73 641 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SFRP5Q5T4F7 317 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 ETFRF1Q6IPR1 90 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLC29A4Q7RTT9 530 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 FAM46DQ8NEK8 389 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 POM121Q96HA1 1249 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 S100A13Q99584 98 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 CXXC1Q9P0U4 656 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 RPS6KB2Q9UBS0 482 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 A0A087X0M5 115 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 A0A1B0GX30 115 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLC35F4A4IF30 521 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 TRAPPC13A5PLN9 417 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 SGK494L7N484 410 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 PRKYO43930 277 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 KDELR2P33947 212 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 CRATP43155 626 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 AADACL4Q5VUY2 407 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLC22A10Q63ZE4 541 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 TMEM107Q6UX40 140 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 PINK1Q9BXM7 581 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 HEXA-AS1Q9H8Q6 139 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 TPT1P8Q9HAU6 139 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 EFCAB7A8K855 629 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 WISP3O95389 354 aaPredicted RBP13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 CSF2RBP32927 897 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZNF234Q14588 700 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 NKAPLQ5M9Q1 402 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 ACER2Q5QJU3 275 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 FRG2Q64ET8 278 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 ARL11Q969Q4 196 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 PEX11GQ96HA9 241 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 FRG2BQ96QU4 278 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 SFXN1Q9H9B4 322 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 WDR81Q562E7 1941 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLC16A5O15375 505 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 REM1O75628 298 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 ABLIM3O94929 683 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 PEX11BO96011 259 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 ATP5A1P25705 553 aaKnown RBP13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 SEC61A1P61619 476 aaKnown RBP13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 YBX1P67809 324 aaKnown RBP13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 SERPINA11Q86U17 422 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR6K2Q8NGY2 324 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 RXFP4Q8TDU9 374 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 DUSP26Q9BV47 211 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 RPS10P5Q9NQ39 176 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZNF225Q9UK10 706 aa13.57□□□□□ -0.24
SYNGAP1-203ENST00000428982 A0A0D9SEW6 157 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 A0A1B0GVC2 190 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 TMEM72A0PK05 275 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 IRGMA1A4Y4 181 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 A6NIN4 97 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 RTL10Q7L3V2 364 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 ADAMTS19Q8TE59 1207 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 UBTD2Q8WUN7 234 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 MRPS24Q96EL2 167 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 LRRC37A2A6NM11 1700 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 UBBP0CG47 229 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 UBCP0CG48 685 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 SAGP10523 405 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 DGKGP49619 791 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 RPS27AP62979 156 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 UBA52P62987 128 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms