RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 HOOK1Q9UJC3 728 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 LAMP5Q9UJQ1 280 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 APPL1Q9UKG1 709 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 TMEM5Q9Y2B1 443 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SNX8Q9Y5X2 465 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 MED13LQ71F56 2210 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SYNDIG1LA6NDD5 238 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 KPNA3O00505 521 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 XPO1O14980 1071 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 BIRC5O15392 142 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZSCAN12O43309 604 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 SMIM24O75264 130 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 SRSF10O75494 262 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 BAG2O95816 211 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 GUCA1CO95843 209 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 IGLV3-27P01718 113 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 APOEP02649 317 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ITIH1P19827 911 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 CHRNA3P32297 505 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLC15A1P46059 708 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ASMTP46597 345 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 LEPRP48357 1165 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 CASP4P49662 377 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ETV1P50549 477 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 B2MP61769 119 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 RPS24P62847 133 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 UBXN1Q04323 297 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 IFFO1Q0D2I5 559 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 MSLNQ13421 630 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 KNOP1Q1ED39 458 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 KLHL40Q2TBA0 621 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ANKDD1AQ495B1 522 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 PIP5KL1Q5T9C9 394 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR6B2Q6IFH4 312 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZNF343Q6P1L6 599 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 TMPRSS11FQ6ZWK6 438 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ERN2Q76MJ5 926 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 TIPARPQ7Z3E1 657 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 CDC20BQ86Y33 519 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 APCDD1Q8J025 514 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 DENND6BQ8NEG7 585 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR10G8Q8NGN5 311 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 VANGL1Q8TAA9 524 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZNF519Q8TB69 540 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 SMAP2Q8WU79 429 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 GTF3AQ92664 365 aaKnown RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 RAB7BQ96AH8 199 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 SERPINB11Q96P15 392 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 COQ7Q99807 217 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 TRIM62Q9BVG3 475 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 ULBP1Q9BZM6 244 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 WWTR1Q9GZV5 400 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 STMN4Q9H169 189 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 VCX3AQ9NNX9 186 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 P4HTMQ9NXG6 502 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 HMGXB4Q9UGU5 601 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 DAPK2Q9UIK4 370 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 SH3BGRL2Q9UJC5 107 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 TIMM22Q9Y584 194 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 HIVEP3Q5T1R4 2406 aa4.02□□□□□ -1.77
HMGB3P5-201ENST00000428894 F8P00451 2351 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 NAV3Q8IVL0 2385 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 C15orf61A6NNL5 157 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 YJEFN3A6XGL0 299 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 E7ENQ6 273 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 F5H5T6 163 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 GOLGA8MH3BSY2 632 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 INPP4BO15327 924 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZBTB14O43829 449 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 IDH3BO43837 385 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR10H2O60403 315 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 RAD1O60671 282 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 CPNE6O95741 557 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 HLA-DRAP01903 254 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLC2A3P11169 496 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 RPS2P15880 293 aaKnown RBP4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 PDGFRAP16234 1089 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 TCN2P20062 427 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 ALDH3A1P30838 453 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 CSTF2P33240 577 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 HOXD13P35453 343 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 UGT1A3P35503 534 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 TRIM23P36406 574 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 PSMB10P40306 273 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 ETV5P41161 510 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 RPL21P46778 160 aaKnown RBP4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 STK19P49842 368 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 PNLIPRP2P54317 469 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 MAZP56270 477 aaKnown RBP4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 PFN3P60673 137 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 KLC1Q07866 573 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 ADIGQ0VDE8 80 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 BST2Q10589 180 aaKnown RBP4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 CDC20Q12834 499 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 C1orf61Q13536 156 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 TRA2AQ13595 282 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 GNA13Q14344 377 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 MAPRE2Q15555 327 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLC25A53Q5H9E4 307 aa4.01□□□□□ -1.77
HMGB3P5-201ENST00000428894 RABGAP1LQ5R372 815 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms