RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 BEX4Q9NWD9 120 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 GIN1Q9NXP7 522 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 ATP6V1HQ9UI12 483 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 MCTS1Q9ULC4 181 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 PROCRQ9UNN8 238 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 TESMINQ9Y4I5 508 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 PTGDR2Q9Y5Y4 395 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 PRRC2AP48634 2157 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 A0A1W2PQD3 144 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 GXYLT2A0PJZ3 443 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 H3BNH8 94 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 SCAMP2O15127 329 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 KCNK2O95069 426 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 ATE1O95260 518 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 PLGP00747 810 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 BCKDHAP12694 445 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 ALDH3A1P30838 453 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 POU6F2P78424 691 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 MAD2L1Q13257 205 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 LSM12Q3MHD2 195 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 ARL13AQ5H913 290 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 GTF2IRD2BQ6EKJ0 949 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 ANKRD26P1Q6NSI1 321 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 BHLHB9Q6PI77 547 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 FAM214BQ7L5A3 538 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 MTERF4Q7Z6M4 381 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 GTF2IRD2Q86UP8 949 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 GTPBP8Q8N3Z3 284 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 OR56A1Q8NGH5 318 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 OR2T11Q8NH01 316 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 FNDC9Q8TBE3 224 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 MOAP1Q96BY2 351 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 CHMP6Q96FZ7 201 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 BTBD2Q9BX70 525 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 HOXD1Q9GZZ0 328 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 C12orf65Q9H3J6 166 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 LIME1Q9H400 295 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 TUBB1Q9H4B7 451 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 PLEKHF2Q9H8W4 249 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 ZCCHC3Q9NUD5 404 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 FLRT3Q9NZU0 649 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 FAF1Q9UNN5 650 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 VDAC3Q9Y277 283 aa13.93□□□□□ -0.18
CTDSP1-202ENST00000428361 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 A0A1W2PRB8 838 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 B4DXG7 233 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 C16orf97H3BN30 126 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 EIF1AYO14602 144 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 PIP5K1BO14986 540 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 SYNGR4O95473 234 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 PABPC4LP0CB38 370 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 KIR2DL2P43627 348 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 EIF1AXP47813 144 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 CTBP2P56545 445 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 CLDN15P56746 228 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 SIRPAP78324 504 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 TMEM44Q2T9K0 475 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 ZNF385BQ569K4 471 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 CPTPQ5TA50 214 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 VWA1Q6PCB0 445 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 EMBQ6PCB8 327 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 ESPNLQ6ZVH7 1005 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 KIRREL3Q8IZU9 778 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 OR6K3Q8NGY3 331 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 CLHC1Q8NHS4 586 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 FAM110BQ8TC76 370 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 OR5P2Q8WZ92 322 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 FIG4Q92562 907 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 GIMAP5Q96F15 307 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 GMPPAQ96IJ6 420 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 PIGUQ9H490 435 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
CTDSP1-202ENST00000428361 GJE1A6NN92 205 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 C17orf51A8MQB3 221 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 ARHGEF9O43307 516 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 IGKV1D-16P01601 117 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 CHRNGP07510 517 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 ACP2P11117 423 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 PPP3CBP16298 524 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 PRPS1L1P21108 318 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 FPR1P21462 350 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 ELK4P28324 431 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 UGT2B10P36537 528 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 SUCLG1P53597 346 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 SUMO3P55854 103 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 CLDN20P56880 219 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 RAC1P63000 192 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 FAM27E3Q08E93 113 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 TP53BP2Q13625 1128 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 DUSP5Q16690 384 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 SPDYE7PQ495Y7 208 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 SHEQ5VZ18 495 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 PPP4R4Q6NUP7 873 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 FIGNL1Q6PIW4 674 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 PLXDC2Q6UX71 529 aa13.91□□□□□ -0.18
CTDSP1-202ENST00000428361 BTLAQ7Z6A9 289 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms