RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CASP12Q6UXS9 341 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 ZNF813Q6ZN06 617 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 SIAH3Q8IW03 269 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 TCEAL3Q969E4 200 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 DACT3Q96B18 629 aaPredicted RBP4.81□□□□□ -1.64
RIF1-203ENST00000428287 MS4A3Q96HJ5 214 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 BRD7Q9NPI1 651 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 TREM2Q9NZC2 230 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 FBXW2Q9UKT8 454 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 ZMIZ1Q9ULJ6 1067 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 LTBP3Q9NS15 1303 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 CXorf51AA0A1B0GTR3 108 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 TRBC2A0A5B9 178 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 ANXA2P2A6NMY6 339 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 TEX46H3BTG2 121 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 CHST10O43529 356 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 STX11O75558 287 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 TOXO94900 526 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 LRATO95237 230 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 ZNF626Q68DY1 528 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 PTRHD1Q6GMV3 140 aaKnown RBP4.81□□□□□ -1.64
RIF1-203ENST00000428287 UNQ9370/PRO34162Q6UXP9 181 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 BAIAP2L2Q6UXY1 529 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 GJD3Q8N144 294 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 SAMD12Q8N8I0 201 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.81□□□□□ -1.64
RIF1-203ENST00000428287 OR6N1Q8NGY5 312 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 TAAR9Q96RI9 348 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 PKP4Q99569 1192 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 PTDSS2Q9BVG9 487 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 R3HDMLQ9H3Y0 253 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 A4GALTQ9NPC4 353 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 SLC22A14Q9Y267 594 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 GPR179Q6PRD1 2367 aa4.81□□□□□ -1.64
RIF1-203ENST00000428287 A0A0D9SEW6 157 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 H3BN98 237 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SYT5O00445 386 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PPP3CBP16298 524 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 STARD6P59095 220 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 MAT1AQ00266 395 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 TSPAN31Q12999 210 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PRAMEF8Q5VWM4 474 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PRAMEF7Q5VXH5 474 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 CXorf57Q6NSI4 855 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 ZNF852Q6ZMS4 543 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 LINGO2Q7L985 606 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SVBPQ8N300 66 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 FBXO15Q8NCQ5 510 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 CLP1Q92989 425 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 ARL5BQ96KC2 179 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PGLYRP3Q96LB9 341 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 MTERF1Q99551 399 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 SEBOXQ9HB31 216 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 GSN-AS1Q9NRJ2 163 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 KLK14Q9P0G3 267 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 RBPJLQ9UBG7 517 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PPP2R3BQ9Y5P8 575 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 FAM227AF5H4B4 570 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 L7N2F9 121 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 UBE2CO00762 179 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SLC16A5O15375 505 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 APOC3P02656 99 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 CD1AP06126 327 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SSTR2P30874 369 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 HOXA6P31267 233 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 E2F1Q01094 437 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 GINS1Q14691 196 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 GPR68Q15743 365 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 C5orf46Q6UWT4 87 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 GLDNQ6ZMI3 551 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 FAM83HQ6ZRV2 1179 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 OR6T1Q8NGN1 323 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 C12orf66Q96MD2 445 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 GPR63Q9BZJ6 419 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 ARL15Q9NXU5 204 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 METTL1Q9UBP6 276 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 MRPS7Q9Y2R9 242 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 TMEM218A2RU14 115 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 IGHV2-5P01817 119 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SCAND1P57086 179 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 NLRC3Q7RTR2 1065 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PLEKHH3Q7Z736 793 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 DENND1CQ8IV53 801 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 KDF1Q8NAX2 398 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 TEX47Q8TBZ9 253 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 CXorf58Q96LI9 332 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 MS4A4EQ96PG1 132 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 TUBA4BQ9H853 241 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 MED11Q9P086 117 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 RGS17Q9UGC6 210 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 PCDHGC4Q9Y5F7 938 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SESN1Q9Y6P5 492 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 A0A0G2JLL6 359 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 ADAM12O43184 909 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 CRATP43155 626 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 C18orf21Q32NC0 220 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 ZNF792Q3KQV3 632 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SGO1Q5FBB7 561 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SLC25A25Q6KCM7 469 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 RASSF6Q6ZTQ3 369 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms