RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 OTOL1A6NHN0 477 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-204ENST00000428026 OR6C65A6NJZ3 312 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 NPIPA2E9PIF3 369 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 NPIPA3F8WFD2 350 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 IFNA4P05014 189 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 FGF4P08620 206 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 MAOAP21397 527 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 HOXC5Q00444 222 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 NADSYN1Q6IA69 706 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 ALKAL2Q6UX46 152 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 LARP4Q71RC2 724 aaKnown RBP eCLIP13.67□□□□□ -0.223e-11■□□□□ 9.9
PTPRU-204ENST00000428026 MFSD6LQ8IWD5 586 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 GGHQ92820 318 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 ZNF689Q96CS4 500 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-204ENST00000428026 FN3KQ9H479 309 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 LDAHQ9H6V9 325 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 DDX31Q9H8H2 851 aaKnown RBP13.67□□□□□ -0.22
PTPRU-204ENST00000428026 UNKLQ9H9P5 680 aaKnown RBP13.67□□□□□ -0.22
PTPRU-204ENST00000428026 MYH7BA7E2Y1 1941 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 CCDC163A0A0D9SF12 145 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 A6NL46 340 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 BRINP1O60477 761 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 SLC16A8O95907 504 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 PLCXD2Q0VAA5 305 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 P2RY14Q15391 338 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 ARSJQ5FYB0 599 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-204ENST00000428026 TMEM234Q8WY98 164 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 HOXB13Q92826 284 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-204ENST00000428026 ZNF334Q9HCZ1 680 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-204ENST00000428026 RFXAPO00287 272 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 SSX2Q16385 188 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 OR4D6Q8NGJ1 314 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 RNF215Q9Y6U7 377 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 M0QZQ0 153 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 M6PRP20645 277 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 EPHA1P21709 976 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 MSX1P28360 303 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 SELPLGQ14242 412 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 ACSM3Q53FZ2 586 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 LRIF1Q5T3J3 769 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 SLC18B1Q6NT16 456 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 RANBP10Q6VN20 620 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 SLC9B2Q86UD5 537 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 CELF2-AS1Q8N7Q2 184 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 ACVR1CQ8NER5 493 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 CD200R1Q8TD46 325 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 CHPT1Q8WUD6 406 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 DHRS4Q9BTZ2 278 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 GON7Q9BXV9 100 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 HRH4Q9H3N8 390 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 NOX3Q9HBY0 568 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 GPATCH2Q9NW75 528 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 SLCO3A1Q9UIG8 710 aa13.67□□□□□ -0.22
PTPRU-204ENST00000428026 TRAPPC13A5PLN9 417 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 GYPBP06028 91 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 DRD2P14416 443 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 SDC1P18827 310 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 HNRNPKP61978 463 aaKnown RBP eCLIP13.66□□□□□ -0.221e-9■■■■□ 25.8
PTPRU-204ENST00000428026 TAP2Q03519 686 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 SDR9C7Q8NEX9 313 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 OR2T4Q8NH00 348 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 OR1F2PQ96R84 312 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 KCNJ16Q9NPI9 418 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 IFNA10P01566 189 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 PROS1P07225 676 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 PIM1P11309 404 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-204ENST00000428026 HMGCLP35914 325 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 ZNF136P52737 540 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 SCAPQ12770 1279 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 ZNF585AQ6P3V2 769 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 GPR149Q86SP6 731 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 VRK1Q99986 396 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-204ENST00000428026 ZNF559Q9BR84 538 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 SORBS1Q9BX66 1292 aaKnown RBP13.66□□□□□ -0.22
PTPRU-204ENST00000428026 USP36Q9P275 1121 aaKnown RBP13.66□□□□□ -0.22
PTPRU-204ENST00000428026 SLC6A5Q9Y345 797 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 MRPS14O60783 128 aaKnown RBP13.66□□□□□ -0.22
PTPRU-204ENST00000428026 PRAMEF2O60811 474 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 GPR37L1O60883 481 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 ADH1BP00325 375 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 IFNGR1P15260 489 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 CERS1P27544 350 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 POLR2IP36954 125 aaKnown RBP13.66□□□□□ -0.22
PTPRU-204ENST00000428026 APCDD1Q8J025 514 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 LILRA2Q8N149 483 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 LILRB2Q8N423 598 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 POC1BQ8TC44 478 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 ST6GALNAC5Q9BVH7 336 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 HINT2Q9BX68 163 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 ZNF175Q9Y473 711 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 EDN1P05305 212 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 RING1Q06587 406 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 TMEM164Q5U3C3 297 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 KLHDC8AQ8IYD2 350 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 TEX19Q8NA77 164 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 NELFAQ9H3P2 528 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 LATO43561 262 aa13.66□□□□□ -0.22
PTPRU-204ENST00000428026 PRAF2O60831 178 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms