RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 AMTP48728 403 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 ARFIP1P53367 373 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 GNGT1P63211 74 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 EEF1A2Q05639 463 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 BTKQ06187 659 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 ZFP36L1Q07352 338 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 SF3A3Q12874 501 aaKnown RBP eCLIP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 CHIT1Q13231 466 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 IGFBP7Q16270 282 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 FAM76BQ5HYJ3 339 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 FRG2Q64ET8 278 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 ADNP2Q6IQ32 1131 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 GUSBP11Q6P575 273 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 FAM47EQ6ZV65 393 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 GPRIN3Q6ZVF9 776 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 PRSS42Q7Z5A4 293 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 FJX1Q86VR8 437 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 SYTL1Q8IYJ3 562 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 KIRREL3Q8IZU9 778 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 DNAJC22Q8N4W6 341 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 CCNYL1Q8N7R7 359 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 CCDC63Q8NA47 563 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 OR7G3Q8NG95 312 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 OR2T11Q8NH01 316 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 ZNF473Q8WTR7 871 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 C10orf82Q8WW14 230 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 NAT6Q93015 286 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 EXT2Q93063 718 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 SLC22A18Q96BI1 424 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 METTL2AQ96IZ6 378 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 CNDP2Q96KP4 475 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 C3orf30Q96M34 536 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 PPM1MQ96MI6 270 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 DUX5Q96PT3 197 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 TRAPPC9Q96Q05 1148 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 FRG2BQ96QU4 278 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 KCNA7Q96RP8 456 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 CCT8L2Q96SF2 557 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 CCT7Q99832 543 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 EGFL8Q99944 293 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 SIKE1Q9BRV8 207 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 EFCAB11Q9BUY7 163 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 ILKAPQ9H0C8 392 aaPredicted RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 STN1Q9H668 368 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 ZNF385DQ9H6B1 395 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 DDX31Q9H8H2 851 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 MEAF6Q9HAF1 191 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 EML4Q9HC35 981 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 ASCL3Q9NQ33 180 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 LHX9Q9NQ69 397 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 HRASLS2Q9NWW9 162 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 TAC3Q9UHF0 121 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 BTRCQ9Y297 605 aa5.08□□□□□ -1.6
C9orf3-205ENST00000427193 TDRKHQ9Y2W6 561 aaKnown RBP5.08□□□□□ -1.6
C9orf3-205ENST00000427193 TP53BP1Q12888 1972 aaPredicted RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 IGHV5-51A0A0C4DH38 117 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 A0A0J9YY10 115 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TRBC2A0A5B9 178 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TLCD2A6NGC4 264 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 C2orf74A8MZ97 194 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 PIP5K1BO14986 540 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ANKRD28O15084 1053 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 HCRTR1O43613 425 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 KIF1CO43896 1103 aaKnown RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SOX30O94993 753 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SCELO95171 688 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ETHE1O95571 254 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 HSPA4LO95757 839 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 HLA-DQA2P01906 255 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SMIM10L1P0DMW3 83 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ALPPL2P10696 532 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 THRAP10827 490 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 CDH1P12830 882 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 HSD3B1P14060 373 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ZNF12P17014 697 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 CKMT2P17540 419 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 POLR2CP19387 275 aaPredicted RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 MAGP20916 626 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SERPINB3P29508 390 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 CCR8P51685 355 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 NUDT6P53370 316 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 GFERP55789 205 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 OR1D5P58170 312 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 IRF8Q02556 426 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TBL3Q12788 808 aaKnown RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ESPL1Q14674 2120 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ABRAXAS2Q15018 415 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ZRSR2Q15696 482 aaKnown RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SMU1Q2TAY7 513 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ZNF718Q3SXZ3 478 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SLC9B1Q4ZJI4 515 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 CFAP157Q5JU67 520 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TCHHL1Q5QJ38 904 aaPredicted RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SH2D4BQ5SQS7 431 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 FAM91A1Q658Y4 838 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 CLEC6AQ6EIG7 209 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 WBP2NLQ6ICG8 309 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 HEPHL1Q6MZM0 1159 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 KLHL35Q6PF15 583 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TMIGD1Q6UXZ0 262 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms