RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 OR4K17Q8NGC6 315 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 TSPEARQ8WU66 669 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 ZNF350Q9GZX5 532 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 TPT1P8Q9HAU6 139 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 POLE3Q9NRF9 147 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 SH3BGRL2Q9UJC5 107 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 MEMO1Q9Y316 297 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 PCDHB14Q9Y5E9 798 aa21.35■■□□□ 1.01
PDGFA-205ENST00000426681 DOPEY1Q5JWR5 2465 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 E9PLN8 166 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 ZIC3O60481 467 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 FCMRO60667 390 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 CD1EP15812 388 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 DPP4P27487 766 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 GANABQ14697 944 aaKnown RBP21.34■■□□□ 1.01
PDGFA-205ENST00000426681 LRIF1Q5T3J3 769 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 VASNQ6EMK4 673 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 MTERF4Q7Z6M4 381 aaKnown RBP21.34■■□□□ 1.01
PDGFA-205ENST00000426681 EID3Q8N140 333 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 OIT3Q8WWZ8 545 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 ROPN1LQ96C74 230 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 VKORC1Q9BQB6 163 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 SAP130Q9H0E3 1048 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 TP63Q9H3D4 680 aaPredicted RBP21.34■■□□□ 1.01
PDGFA-205ENST00000426681 PTGES2Q9H7Z7 377 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 PNPLA3Q9NST1 481 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 TAS2R10Q9NYW0 307 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 MED11Q9P086 117 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 ACAD8Q9UKU7 415 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 LIPT1Q9Y234 373 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 PCNX3Q9H6A9 2034 aa21.34■■□□□ 1.01
PDGFA-205ENST00000426681 C15orf38-AP3S2A0A0A6YYH1 394 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 PRAMEF27A3QJZ7 478 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 ACTL6AO96019 429 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 MSX1P28360 303 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 CRYZQ08257 329 aaKnown RBP21.33■■□□□ 1.01
PDGFA-205ENST00000426681 FUT5Q11128 374 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 ZNF141Q15928 474 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 GTDC1Q4AE62 458 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 COX20Q5RI15 118 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 WLSQ5T9L3 541 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 OR14L1PQ8NHC6 308 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 PNPT1Q8TCS8 783 aaKnown RBP21.33■■□□□ 1.01
PDGFA-205ENST00000426681 DMRTA2Q96SC8 542 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 TIMP4Q99727 224 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 TNFRSF10DQ9UBN6 386 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 SUCOQ9UBS9 1254 aaKnown RBP21.33■■□□□ 1.01
PDGFA-205ENST00000426681 DKKL1Q9UK85 242 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 SLC6A5Q9Y345 797 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 GMEB1Q9Y692 573 aa21.33■■□□□ 1.01
PDGFA-205ENST00000426681 ZIC2O95409 532 aaPredicted RBP21.32■■□□□ 1
PDGFA-205ENST00000426681 RNF224P0DH78 156 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 ESRRAP11474 423 aaPredicted RBP21.32■■□□□ 1
PDGFA-205ENST00000426681 BMP7P18075 431 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 CD226Q15762 336 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 PAGE3Q5JUK9 113 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.32■■□□□ 1
PDGFA-205ENST00000426681 IFNEQ86WN2 208 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 OR5M9Q8NGP3 310 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 PHF10Q8WUB8 498 aaKnown RBP21.32■■□□□ 1
PDGFA-205ENST00000426681 AURKBQ96GD4 344 aaPredicted RBP21.32■■□□□ 1
PDGFA-205ENST00000426681 TRNT1Q96Q11 434 aaKnown RBP21.32■■□□□ 1
PDGFA-205ENST00000426681 SLC25A37Q9NYZ2 338 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 SLAMF8Q9P0V8 285 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 DTNAQ9Y4J8 743 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 DOPEY2Q9Y3R5 2298 aa21.32■■□□□ 1
PDGFA-205ENST00000426681 NPIPA5A0A0B4J1W7 369 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 NPIPA7E9PJI5 369 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 H3BNH8 94 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 KIAA0513O60268 411 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 WDR1O75083 606 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 HOXD4P09016 255 aaPredicted RBP21.31■■□□□ 1
PDGFA-205ENST00000426681 NPIPA8P0DM63 369 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 GCKP35557 465 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 GFRA1P56159 465 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 GPR68Q15743 365 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 ZNF630Q2M218 657 aaPredicted RBP21.31■■□□□ 1
PDGFA-205ENST00000426681 GLYR1Q49A26 553 aaPredicted RBP21.31■■□□□ 1
PDGFA-205ENST00000426681 TYW3Q6IPR3 259 aaKnown RBP21.31■■□□□ 1
PDGFA-205ENST00000426681 GATSQ8NAP1 163 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 C10orf82Q8WW14 230 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 ABTB1Q969K4 478 aaPredicted RBP21.31■■□□□ 1
PDGFA-205ENST00000426681 C1GALT1C1Q96EU7 318 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 CCDC120Q96HB5 630 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 UGT2B28Q9BY64 529 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 SAR1AQ9NR31 198 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 THUMPD1Q9NXG2 353 aaKnown RBP21.31■■□□□ 1
PDGFA-205ENST00000426681 KCNE5Q9UJ90 142 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 MKLN1Q9UL63 735 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 WDR45Q9Y484 360 aa21.31■■□□□ 1
PDGFA-205ENST00000426681 USP9YO00507 2555 aaPredicted RBP21.31■■□□□ 1
PDGFA-205ENST00000426681 TRBV5-3A0A0A0MS03 114 aa21.3■■□□□ 1
PDGFA-205ENST00000426681 FIGNL2A6NMB9 653 aa21.3■■□□□ 1
PDGFA-205ENST00000426681 CLIC1O00299 241 aa21.3■■□□□ 1
PDGFA-205ENST00000426681 UGT2B17O75795 530 aa21.3■■□□□ 1
PDGFA-205ENST00000426681 CHMP24386 653 aa21.3■■□□□ 1
PDGFA-205ENST00000426681 ACVR2AP27037 513 aa21.3■■□□□ 1
PDGFA-205ENST00000426681 B3GALT5-AS1P59052 145 aa21.3■■□□□ 1
PDGFA-205ENST00000426681 SF3A3Q12874 501 aaKnown RBP eCLIP21.3■■□□□ 1
PDGFA-205ENST00000426681 C3P1Q6ZMU1 363 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms