RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 FITM2Q8N6M3 262 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 GATSQ8NAP1 163 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 ZNF527Q8NB42 609 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 ZG16BQ96DA0 208 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 GPR137Q96N19 417 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 DEFB127Q9H1M4 99 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 UBQLN3Q9H347 655 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 RUBCNLQ9H714 662 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 EFCAB1Q9HAE3 211 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 PPP4R1LQ9P1A2 415 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 B4GALT7Q9UBV7 327 aa22.33■■□□□ 1.16
VEGFA-209ENST00000425836 CENPVL1A0A0U1RR11 272 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 NDUFB5O43674 189 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 UGT2B17O75795 530 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 BCHEP06276 602 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 GCNT6Q5T4J0 391 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 BNC2Q6ZN30 1099 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-209ENST00000425836 OR8J3Q8NGG0 315 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 TMEM19Q96HH6 336 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 KAT8Q9H7Z6 458 aaKnown RBP22.32■■□□□ 1.16
VEGFA-209ENST00000425836 FBXL2Q9UKC9 423 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 DTNAQ9Y4J8 743 aa22.32■■□□□ 1.16
VEGFA-209ENST00000425836 CBR3O75828 277 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 CELA3AP09093 270 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 EDN3P14138 238 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 RNF144AP50876 292 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-209ENST00000425836 FOXK1P85037 733 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 C17orf67Q0P5P2 114 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 CD226Q15762 336 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 ADRM1Q16186 407 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 MAPK14Q16539 360 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 KRTCAP3Q53RY4 240 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 RABL3Q5HYI8 236 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 PDZK1Q5T2W1 519 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 QRSL1Q9H0R6 528 aaKnown RBP22.31■■□□□ 1.16
VEGFA-209ENST00000425836 MTHFD2LQ9H903 347 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-209ENST00000425836 ARL8BQ9NVJ2 186 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 QPCTLQ9NXS2 382 aa22.31■■□□□ 1.16
VEGFA-209ENST00000425836 TMEM247A6NEH6 219 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 ARAFP10398 606 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 GDF1P27539 372 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 CRISP3P54108 245 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 GNA13Q14344 377 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 SLC10A1Q14973 349 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 HMGN2P46Q86SG4 172 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 ZNF614Q8N883 585 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 FADS6Q8N9I5 356 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 SH3GL1Q99961 368 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 DSN1Q9H410 356 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 TMEM38AQ9H6F2 299 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 CALML5Q9NZT1 146 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 MED11Q9P086 117 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 SEC14L3Q9UDX4 400 aa22.3■■□□□ 1.16
VEGFA-209ENST00000425836 IGLV3-32A0A0A0MS00 114 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 PDE9AO76083 593 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 CBX6O95503 412 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 SLC6A2P23975 617 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 ART3Q13508 389 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 RPS26P11Q5JNZ5 115 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-209ENST00000425836 MISPQ8IVT2 679 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 OR2M3Q8NG83 312 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 OR4K17Q8NGC6 315 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 OR10A6Q8NH74 314 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 PHOSPHO1Q8TCT1 267 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 PMM1Q92871 262 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 TREX2Q9BQ50 279 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-209ENST00000425836 GPATCH1Q9BRR8 931 aaKnown RBP22.29■■□□□ 1.16
VEGFA-209ENST00000425836 EML6Q6ZMW3 1958 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 DSPPQ9NZW4 1301 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 SERINC4A6NH21 518 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 NUDT2P50583 147 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 HACD2Q6Y1H2 254 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 MTERF4Q7Z6M4 381 aaKnown RBP22.29■■□□□ 1.16
VEGFA-209ENST00000425836 PTOV1Q86YD1 416 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 ST6GALNAC3Q8NDV1 305 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 OIT3Q8WWZ8 545 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 HHATLQ9HCP6 504 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 BCL2L10Q9HD36 194 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 ACKR4Q9NPB9 350 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 PLSCR2Q9NRY7 297 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 TAGLN3Q9UI15 199 aa22.29■■□□□ 1.16
VEGFA-209ENST00000425836 A0A0G2JPF8 293 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 AGAP5A6NIR3 686 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 HNRNPCL2B2RXH8 293 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 HNRNPCL3B7ZW38 293 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 H3BNH8 94 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 CDC40O60508 579 aaKnown RBP eCLIP22.28■■□□□ 1.162e-13■■□□□ 11.5
VEGFA-209ENST00000425836 HNRNPCL1O60812 293 aaKnown RBP22.28■■□□□ 1.16
VEGFA-209ENST00000425836 TRAPPC6AO75865 159 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 IGHG3P01860 377 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 HPNP05981 417 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 HNRNPCL4P0DMR1 293 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 CPA2P48052 419 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 GZMMP51124 257 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 CDK6Q00534 326 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 KRT72Q14CN4 511 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 CYP51A1Q16850 503 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 PRAMEF8Q5VWM4 474 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 PRAMEF7Q5VXH5 474 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 C8orf82Q6P1X6 216 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms