RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 GP6Q9HCN6 339 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 UBQLN4Q9NRR5 601 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 FBXO34Q9NWN3 711 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SIRT5Q9NXA8 310 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LIPT1Q9Y234 373 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 IGLV3-32A0A0A0MS00 114 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SERTM1A2A2V5 107 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 A8MV72 311 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 UPK1AO00322 258 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ADAMDEC1O15204 470 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CD5LO43866 347 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 THBDP07204 575 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 IFI6P09912 130 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ATP6V1C1P21283 382 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CCKARP32238 428 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LCP2Q13094 533 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CFAP157Q5JU67 520 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 AGAP6Q5VW22 663 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZDHHC24Q6UX98 284 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 IKBIPQ70UQ0 350 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SZRD1Q7Z422 152 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TRABD2AQ86V40 505 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RELL1Q8IUW5 271 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LILRA2Q8N149 483 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OR2L13Q8N349 312 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GTPBP8Q8N3Z3 284 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF527Q8NB42 609 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SLC9A6Q92581 669 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CHMP6Q96FZ7 201 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 APIPQ96GX9 242 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 METTL2AQ96IZ6 378 aaKnown RBP10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TMEM204Q9BSN7 226 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LMF2Q9BU23 707 aaKnown RBP10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 EBPLQ9BY08 206 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ACPTQ9BZG2 426 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HOXD1Q9GZZ0 328 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GRPEL1Q9HAV7 217 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NINJ2Q9NZG7 142 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NCKAP5O14513 1909 aa10.97□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HIVEP2P31629 2446 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ALG1L2C9J202 215 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GTPBP1O00178 669 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PPP6CO00743 305 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TNFSF11O14788 317 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PLAUP00749 431 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ALOX5P09917 674 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ADH6P28332 368 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MAGEA12P43365 314 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MANFP55145 182 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SLC7A5Q01650 507 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ITGADQ13349 1161 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GUSBP1Q15486 140 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GLE1Q53GS7 698 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 UNC50Q53HI1 259 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NCMAPQ5T1S8 102 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SFRP5Q5T4F7 317 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZCCHC12Q6PEW1 402 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 FIGNL1Q6PIW4 674 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RPS27LQ71UM5 84 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CCNYL1Q8N7R7 359 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 B4GALNT2Q8NHY0 566 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NANOS1Q8WY41 292 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 S100PBPQ96BU1 408 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 KLHL15Q96M94 604 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 BEX2Q9BXY8 128 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MID1IP1Q9NPA3 183 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MYNNQ9NPC7 610 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 EQTNQ9NQ60 294 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CISD1Q9NZ45 108 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 DCDC2Q9UHG0 476 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CDC42EP3Q9UKI2 254 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ADAM21Q9UKJ8 722 aa10.96□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MAP1AP78559 2803 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 EXOC1LA0A1B0GW35 172 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 C7orf72A4D263 438 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PDPK1O15530 556 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SEC22BO75396 215 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NME6O75414 186 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 YES1P07947 543 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NGFRP08138 427 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CHN1P15882 459 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 LOXP28300 417 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SLC7A1P30825 629 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SLC6A8P48029 635 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PRIM2P49643 509 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RAE1P78406 368 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FAPQ12884 760 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GRAMD1BQ3KR37 738 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF672Q499Z4 452 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 DNAJC14Q6Y2X3 702 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MTERF4Q7Z6M4 381 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GALNT10Q86SR1 603 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GGNQ86UU5 652 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 P2RY8Q86VZ1 359 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NUP43Q8NFH3 380 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 IFT81Q8WYA0 676 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ROBO4Q8WZ75 1007 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RNF145Q96MT1 663 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 DOCK7Q96N67 2140 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms