RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 HSD17B13Q7Z5P4 300 aaPredicted RBP10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 CEACAM19Q7Z692 300 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF740Q8NDX6 193 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 WBP2Q969T9 261 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 CAPNS2Q96L46 248 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 FCRL1Q96LA6 429 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 TRIM62Q9BVG3 475 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 NKX6-2Q9C056 277 aaPredicted RBP10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ACTR6Q9GZN1 396 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC6A16Q9GZN6 736 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 PIPOXQ9P0Z9 390 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 BTNL2Q9UIR0 455 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ANGPT4Q9Y264 503 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 A0A1W2PRB8 838 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 PLSCR5A0PG75 271 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 AIPO00170 330 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 THBS2P35442 1172 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 PREPP48147 710 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 PTSQ03393 145 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 TUSC3Q13454 348 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 NCEH1Q6PIU2 408 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 LRRN1Q6UXK5 716 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 THOC6Q86W42 341 aaKnown RBP10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 BPIFCQ8NFQ6 507 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ING5Q8WYH8 240 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 UROC1Q96N76 676 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 FNDC11Q9BVV2 318 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC6A20Q9NP91 592 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 NDRG3Q9UGV2 375 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 DPP7Q9UHL4 492 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 PURGQ9UJV8 347 aaKnown RBP10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 MAFFQ9ULX9 164 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 SH2B3Q9UQQ2 575 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ALPK2Q86TB3 2170 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ABHD14A-ACY1A0A1B0GW23 586 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 C17orf102A2RUQ5 167 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PRODHO43272 600 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PRMT3O60678 531 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 MST1P26927 711 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 BUD31P41223 144 aaPredicted RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 REEP3Q6NUK4 255 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC27A4Q6P1M0 643 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 CD200R1LQ6Q8B3 271 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 L3MBTL4Q8NA19 623 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 C17orf47Q8NEP4 570 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 OR6T1Q8NGN1 323 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 SPSB2Q99619 263 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 POLDIP3Q9BY77 421 aaKnown RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 RSPH9Q9H1X1 276 aaPredicted RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 SAGE1Q9NXZ1 904 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 CTSFQ9UBX1 484 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PLXND1Q9Y4D7 1925 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 A0A0G2JN53 185 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 TMEM129A0AVI4 362 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 D6RAR5 112 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 GATCO43716 136 aaKnown RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 RP2O75695 350 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 GNSP15586 552 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PBLDP30039 288 aaPredicted RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 CALCRP30988 508 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 GDNFP39905 211 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 NSG1P42857 185 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 GPR4P46093 362 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 VEGFBP49765 207 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 RAB13P51153 203 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 CDC42EP1Q00587 391 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 FZD5Q13467 585 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 GUCA2BQ16661 112 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 FAM26DQ5JW98 314 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 ANXA8L1Q5VT79 327 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 COMMD6Q7Z4G1 85 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF280BQ86YH2 543 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PDZD9Q8IXQ8 264 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 STK35Q8TDR2 534 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 ECHDC3Q96DC8 303 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 C11orf49Q9H6J7 331 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 CORO2BQ9UQ03 480 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 Q9Y3F1 56 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 MYO16Q9Y6X6 1858 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 CPSF4LA6NMK7 179 aaKnown RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 KCNAB3O43448 404 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PEX14O75381 377 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 AKR7A3O95154 331 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 KLKB1P03952 638 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 SPP1P10451 314 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 ACP5P13686 325 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 HCCSP53701 268 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PCBP3P57721 371 aaKnown RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 FGL1Q08830 312 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 RAB40BQ12829 278 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 SWI5Q1ZZU3 235 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 HBMQ6B0K9 141 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 APOOLQ6UXV4 268 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 TMUB2Q71RG4 321 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 MCATQ8IVS2 390 aaKnown RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 OR10K1Q8NGX5 313 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 ING1Q9UK53 422 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms