RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 COQ8BQ96D53 544 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 STARD4Q96DR4 205 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 ZNF845Q96IR2 970 aaPredicted RBP16.64■□□□□ 0.25
NUP50-207ENST00000424634 PIGQQ9BRB3 760 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 ZCCHC3Q9NUD5 404 aaKnown RBP16.64■□□□□ 0.25
NUP50-207ENST00000424634 SLC22A20A6NK97 555 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 LINC01387J3KSC0 135 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 SEC14L5O43304 696 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 CTIFO43310 598 aaKnown RBP16.63■□□□□ 0.25
NUP50-207ENST00000424634 TNFRSF21O75509 655 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 ART1P52961 327 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 LASP1Q14847 261 aaKnown RBP16.63■□□□□ 0.25
NUP50-207ENST00000424634 KRT71Q3SY84 523 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 CPTPQ5TA50 214 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 CHMP1BQ7LBR1 199 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 P4HA3Q7Z4N8 544 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 PSMA8Q8TAA3 256 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 OR5P2Q8WZ92 322 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 TUBGCP3Q96CW5 907 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 PINK1Q9BXM7 581 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 C20orf27Q9GZN8 174 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 ACBD3Q9H3P7 528 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 PIGMQ9H3S5 423 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 CXorf36Q9H7Y0 433 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 VDAC3Q9Y277 283 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 SNX8Q9Y5X2 465 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 KCNE3Q9Y6H6 103 aa16.63■□□□□ 0.25
NUP50-207ENST00000424634 NDUFB5O43674 189 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 ZNF500O60304 480 aaPredicted RBP16.62■□□□□ 0.25
NUP50-207ENST00000424634 C6orf47O95873 294 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 G6PDP11413 515 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
NUP50-207ENST00000424634 KIR2DL2P43627 348 aaPredicted RBP16.62■□□□□ 0.25
NUP50-207ENST00000424634 CCT3P49368 545 aaKnown RBP16.62■□□□□ 0.25
NUP50-207ENST00000424634 PRIM2P49643 509 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 EEFSECP57772 596 aaKnown RBP16.62■□□□□ 0.25
NUP50-207ENST00000424634 MPP2Q14168 576 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 VWA1Q6PCB0 445 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 BTLAQ7Z6A9 289 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 GGNQ86UU5 652 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 COX18Q8N8Q8 333 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 FNDC9Q8TBE3 224 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 SMPDL3BQ92485 455 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 JADE3Q92613 823 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 CDS1Q92903 461 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 BTBD2Q9BX70 525 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 UBQLN4Q9NRR5 601 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 CCM2LQ9NUG4 571 aaPredicted RBP16.62■□□□□ 0.25
NUP50-207ENST00000424634 GPATCH2Q9NW75 528 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 ST6GALNAC2Q9UJ37 374 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 PACSIN3Q9UKS6 424 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 AP4B1Q9Y6B7 739 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 MTORP42345 2549 aa16.62■□□□□ 0.25
NUP50-207ENST00000424634 SETD2Q9BYW2 2564 aaPredicted RBP16.62■□□□□ 0.25
NUP50-207ENST00000424634 RGS16O15492 202 aaPredicted RBP16.61■□□□□ 0.25
NUP50-207ENST00000424634 CRHP06850 196 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 DDX5P17844 614 aaKnown RBP16.61■□□□□ 0.25
NUP50-207ENST00000424634 PRPS1L1P21108 318 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 CPA2P48052 419 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 EEF1A1P68104 462 aaKnown RBP16.61■□□□□ 0.25
NUP50-207ENST00000424634 POU6F2P78424 691 aaPredicted RBP16.61■□□□□ 0.25
NUP50-207ENST00000424634 FAM27E3Q08E93 113 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 CD226Q15762 336 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 CHI3L2Q15782 390 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 EEF1A1P5Q5VTE0 462 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 OR2A2Q6IF42 318 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 ZNF781Q8N8C0 355 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 CNEP1R1Q8N9A8 125 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 STACQ99469 402 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 PIGUQ9H490 435 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 RNF122Q9H9V4 155 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 DUSP22Q9NRW4 184 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 GIN1Q9NXP7 522 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 RAB21Q9UL25 225 aa16.61■□□□□ 0.25
NUP50-207ENST00000424634 ZFHX3Q15911 3703 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 MSTNO14793 375 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 HSPA4LO95757 839 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 OPN1LWP04000 364 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 SERPINE1P05121 402 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 DHRS4L1P0CG22 281 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 PSMA4P25789 261 aaKnown RBP16.6■□□□□ 0.25
NUP50-207ENST00000424634 LCN1P31025 176 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 ABCE1P61221 599 aaKnown RBP16.6■□□□□ 0.25
NUP50-207ENST00000424634 EMX2Q04743 252 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 PON3Q15166 354 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 TNFAIP8L3Q5GJ75 292 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 CDC73Q6P1J9 531 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 ZNF474Q6S9Z5 364 aaPredicted RBP16.6■□□□□ 0.25
NUP50-207ENST00000424634 METTL25Q8N6Q8 603 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 PPP1R14CQ8TAE6 165 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 NINJ1Q92982 152 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 PGM2Q96G03 612 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 SH3YL1Q96HL8 342 aaPredicted RBP16.6■□□□□ 0.25
NUP50-207ENST00000424634 PPP1R36Q96LQ0 422 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 DACH2Q96NX9 599 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 ACTRT3Q9BYD9 372 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 SSU72Q9NP77 194 aaKnown RBP16.6■□□□□ 0.25
NUP50-207ENST00000424634 MED17Q9NVC6 651 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 ATAD3AQ9NVI7 634 aa16.6■□□□□ 0.25
NUP50-207ENST00000424634 EIF3LQ9Y262 564 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms