RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 NOA1Q8NC60 698 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 OR4K14Q8NGD5 310 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 OR52R1Q8NGF1 315 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 UHMK1Q8TAS1 419 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 CALML6Q8TD86 181 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 RNF128Q8TEB7 428 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 DUSP19Q8WTR2 217 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 UBE2E3Q969T4 207 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 CPNE4Q96A23 557 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 IQCDQ96DY2 449 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PTCD3Q96EY7 689 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 CMTM7Q96FZ5 175 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 CALR3Q96L12 384 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 NAP1L5Q96NT1 182 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 SLC30A2Q9BRI3 323 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 EFCAB11Q9BUY7 163 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 KIFC1Q9BW19 673 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 MS4A8Q9BY19 250 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 TBL1XR1Q9BZK7 514 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 TPK1Q9H3S4 243 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 IARS2Q9NSE4 1012 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PAK5Q9P286 719 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 SOX13Q9UN79 622 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PLLPQ9Y342 182 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PCDHGB5Q9Y5G0 923 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 CADP27708 2225 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 IGHV3-15A0A0B4J1V0 119 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GOLGA8QA0A0J9YX86 632 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 A0A1B0GTH6 734 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 A0A1W2PS29 197 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GOLGA8OA6NCC3 632 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 NPEPPSL1A6NEC2 478 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SMTNL1A8MU46 457 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GOLGA8NF8WBI6 632 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GOLGA8MH3BSY2 632 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GOLGA8RI6L899 631 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 J3QLI3 93 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 hCG_2039718K7EN88 272 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 PHGDHO43175 533 aaKnown RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ERAL1O75616 437 aaKnown RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GPANK1O95872 356 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 CSF1P09603 554 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 FAM58BPP0C7Q3 252 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ETS1P14921 441 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 PORP16435 677 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 CTNNA1P35221 906 aaKnown RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 PTPN7P35236 360 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 PPICP45877 212 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 OR3A2P47893 321 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 TPM4P67936 248 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 PHEXP78562 749 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SARNPP82979 210 aaKnown RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 IRF8Q02556 426 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SNX1Q13596 522 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ZNHIT3Q15649 155 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF239Q16600 458 aaKnown RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ERCC6LQ2NKX8 1250 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 MST1LQ2TV78 715 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 C18orf21Q32NC0 220 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GLYR1Q49A26 553 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 KLHL22Q53GT1 634 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF628Q5EBL2 1059 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF362Q5T0B9 420 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 C9orf135Q5VTT2 229 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 OLFML2AQ68BL7 652 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ASPHD2Q6ICH7 369 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 FAM111BQ6SJ93 734 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 RAD9BQ6WBX8 426 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF771Q7L3S4 317 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 DOK3Q7L591 496 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GSTA5Q7RTV2 222 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SPATA21Q7Z572 469 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 MARCH3Q86UD3 253 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GAS2L3Q86XJ1 694 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ZCCHC24Q8N2G6 241 aaKnown RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 FADS6Q8N9I5 356 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ATP6V1C2Q8NEY4 427 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SLC9A6Q92581 669 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SLC35A4Q96G79 324 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 KLHL15Q96M94 604 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SERPINB12Q96P63 405 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 CITED1Q99966 193 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 FAM167BQ9BTA0 163 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 MCMBPQ9BTE3 642 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 MS4A7Q9GZW8 240 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 CNOT10Q9H9A5 744 aaKnown RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 GP6Q9HCN6 339 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 CA10Q9NS85 328 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SENP1Q9P0U3 644 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 KLHL9Q9P2J3 617 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 FBXO5Q9UKT4 447 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF490Q9ULM2 529 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-203ENST00000424270 SLC25A15Q9Y619 301 aa5.5□□□□□ -1.53
SDCBP-203ENST00000424270 A0A0J9YW62 118 aa5.49□□□□□ -1.53
SDCBP-203ENST00000424270 A0A1W2PR48 441 aa5.49□□□□□ -1.53
SDCBP-203ENST00000424270 PGRMC2O15173 223 aa5.49□□□□□ -1.53
SDCBP-203ENST00000424270 CCNT2O60583 730 aaKnown RBP5.49□□□□□ -1.53
SDCBP-203ENST00000424270 SEC14L2O76054 403 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms