RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CCT5P48643 541 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 ZNF41P51814 821 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-205ENST00000423214 PRKAG1P54619 331 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 GUSBP1Q15486 140 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 CCDC153Q494R4 210 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 ANKRD34AQ69YU3 496 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 ANKRD26P1Q6NSI1 321 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 GGNQ86UU5 652 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 WDR75Q8IWA0 830 aaKnown RBP14.5□□□□□ -0.09
COL18A1-205ENST00000423214 GATSQ8NAP1 163 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 OR6K3Q8NGY3 331 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 ZBED6CLQ96FA7 236 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-205ENST00000423214 GMPPAQ96IJ6 420 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-205ENST00000423214 METTL2AQ96IZ6 378 aaKnown RBP14.5□□□□□ -0.09
COL18A1-205ENST00000423214 MS4A4EQ96PG1 132 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 HS3ST6Q96QI5 342 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 BDH2Q9BUT1 245 aa14.5□□□□□ -0.09
COL18A1-205ENST00000423214 HIVEP2P31629 2446 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 A0A087WZY1 265 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 COPEO14579 308 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 SMAD7O15105 426 aaKnown RBP14.49□□□□□ -0.09
COL18A1-205ENST00000423214 RGS14O43566 566 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 PLIN3O60664 434 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 SYNGR4O95473 234 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 OXSR1O95747 527 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-205ENST00000423214 IGKV1D-16P01601 117 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 NEFHP12036 1026 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 HPGDP15428 266 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 PPP3CBP16298 524 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 CRHR1P34998 444 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 DNAJB13P59910 316 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 BEX5Q5H9J7 111 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 CLEC6AQ6EIG7 209 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 PRSS57Q6UWY2 283 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 GALNT10Q86SR1 603 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 CDRT4Q8N9R6 151 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 NUP43Q8NFH3 380 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 OR10D3Q8NH80 312 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 CEP70Q8NHQ1 597 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 NUDT8Q8WV74 236 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL18A1-205ENST00000423214 CIDECQ96AQ7 238 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-205ENST00000423214 PPCDCQ96CD2 204 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 EGLN2Q96KS0 407 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 CCT7Q99832 543 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 LRTM1Q9HBL6 345 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 C1orf109Q9NX04 203 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 CLEC4AQ9UMR7 237 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 FIS1Q9Y3D6 152 aa14.49□□□□□ -0.09
COL18A1-205ENST00000423214 USF3Q68DE3 2245 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-205ENST00000423214 ALG1L2C9J202 215 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 SLC28A1O00337 649 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 AKAP10O43572 662 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 SS18L1O75177 396 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-205ENST00000423214 NKX2-2O95096 273 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 LY6G6DO95868 133 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 CHEK2O96017 543 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 CPA3P15088 417 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 PRPH2P23942 346 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 MANFP55145 182 aaKnown RBP14.48□□□□□ -0.09
COL18A1-205ENST00000423214 TMEM44Q2T9K0 475 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 FIGNL1Q6PIW4 674 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 APOOLQ6UXV4 268 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 PLEKHM3Q6ZWE6 761 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 STK32CQ86UX6 486 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 EXOC3L1Q86VI1 746 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 GTPBP8Q8N3Z3 284 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-205ENST00000423214 JADE3Q92613 823 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 ZBTB8AQ96BR9 441 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 ZNF764Q96H86 408 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-205ENST00000423214 MARK4Q96L34 752 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 RNF145Q96MT1 663 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 PPCSQ9HAB8 311 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 TNFRSF12AQ9NP84 129 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 SH3BP4Q9P0V3 963 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 MID2Q9UJV3 735 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 PTGDR2Q9Y5Y4 395 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 JMJD1CQ15652 2540 aa14.48□□□□□ -0.09
COL18A1-205ENST00000423214 SCDO00767 359 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 TNFSF11O14788 317 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 CXCL13O43927 109 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 SLU7O95391 586 aaKnown RBP14.47□□□□□ -0.09
COL18A1-205ENST00000423214 NGFRP08138 427 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 ACP2P11117 423 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 DDX5P17844 614 aaKnown RBP14.47□□□□□ -0.09
COL18A1-205ENST00000423214 SDC1P18827 310 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 SLC6A8P48029 635 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 NR1H2P55055 460 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 RPL38P63173 70 aaKnown RBP14.47□□□□□ -0.09
COL18A1-205ENST00000423214 SLC18A2Q05940 514 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 ZNF385BQ569K4 471 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 PDSS1Q5T2R2 415 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 LIPMQ5VYY2 423 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 BEND4Q6ZU67 534 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 MISPQ8IVT2 679 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 CIARTQ8N365 385 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-205ENST00000423214 COX18Q8N8Q8 333 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 OR6Y1Q8NGX8 325 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 CLHC1Q8NHS4 586 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms