RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 ZSCAN1Q8NBB4 408 aa15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 PIP5K1AQ99755 562 aa15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 ARHGDIGQ99819 225 aa15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 TACO1Q9BSH4 297 aaKnown RBP15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 NDUFAF4Q9P032 175 aa15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 SLC35A3Q9Y2D2 325 aa15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 SAMHD1Q9Y3Z3 626 aaKnown RBP15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 TESMINQ9Y4I5 508 aa15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 DTNAQ9Y4J8 743 aa15.77■□□□□ 0.12
CCDC28B-202ENST00000421922 EXPH5Q8NEV8 1989 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 CENPVL1A0A0U1RR11 272 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 OR6C70A6NIJ9 312 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 TSPAN2O60636 221 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 ICOSLGO75144 302 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 DNAJB5O75953 348 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 OR2J2O76002 312 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 OXSR1O95747 527 aaPredicted RBP15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 CELA2AP08217 269 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 ENDOUP21128 410 aaKnown RBP15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 RRM2P31350 389 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 YAP1P46937 504 aaKnown RBP15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 RNF144AP50876 292 aaPredicted RBP15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 SMIM11AP58511 58 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 TGIF1Q15583 401 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 TBC1D25Q3MII6 688 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 OGFRL1Q5TC84 451 aaPredicted RBP15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 ZDHHC13Q8IUH4 622 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 SVOPLQ8N434 492 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 SLC15A4Q8N697 577 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 NR4A3Q92570 626 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 TMCO6Q96DC7 493 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 FER1L6-AS2Q96M78 137 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 CIB1Q99828 191 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 TBL1XR1Q9BZK7 514 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 ZBTB20Q9HC78 741 aaPredicted RBP15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 KLK13Q9UKR3 277 aa15.77■□□□□ 0.11
CCDC28B-202ENST00000421922 CDHR4A6H8M9 788 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 SERINC4A6NH21 518 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 GTPBP1O00178 669 aaKnown RBP15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 FRS3O43559 492 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 CYP7B1O75881 506 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 CSTAP01040 98 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 SERPINA7P05543 415 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 NAGAP17050 411 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 TBXA2RP21731 343 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 GCKP35557 465 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 CDH12P55289 794 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 TAS2R41P59536 307 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 RPP38P78345 283 aaKnown RBP15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 FGFBP1Q14512 234 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 GANABQ14697 944 aaKnown RBP15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 AP1ARQ63HQ0 302 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 C16orf47Q6ZP98 133 aaPredicted RBP15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 ZBTB49Q6ZSB9 765 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 PLEKHM3Q6ZWE6 761 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 VASH2Q86V25 355 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 CLIP4Q8N3C7 705 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 TMCO5AQ8N6Q1 288 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 OR5M3Q8NGP4 307 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 OR5K1Q8NHB7 308 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 PHOSPHO1Q8TCT1 267 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 APOBEC4Q8WW27 367 aaKnown RBP15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 ASB15Q8WXK1 588 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 C8orf4Q9NR00 106 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 RYDENQ9NUL5 291 aaKnown RBP15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 RLIMQ9NVW2 624 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 KCNE5Q9UJ90 142 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 OAZ3Q9UMX2 235 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 YARS2Q9Y2Z4 477 aaKnown RBP15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 U3KQV3 271 aa15.76■□□□□ 0.11
CCDC28B-202ENST00000421922 BAHCC1Q9P281 2608 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 CLDN24A6NM45 220 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 NPIPB9F8W1W9 429 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 G3V2T6 193 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 TNFRSF11BO00300 401 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 UGT2B11O75310 529 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 ITGA10O75578 1167 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 GADD45GO95257 159 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 ITGAMP11215 1152 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 DNAJA1P31689 397 aaKnown RBP15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 SSR4P51571 173 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 JMJD6Q6NYC1 403 aaPredicted RBP15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 OPN5Q6U736 354 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 ZNF550Q7Z398 422 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 RPS19BP1Q86WX3 136 aaKnown RBP15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 HIPK1Q86Z02 1210 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 LACC1Q8IV20 430 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 ZNF440Q8IYI8 595 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 AMER2Q8N7J2 671 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 CLEC1AQ8NC01 280 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 OR6T1Q8NGN1 323 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 OR4C3Q8NH37 302 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 PHF10Q8WUB8 498 aaKnown RBP15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 NRG4Q8WWG1 115 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 PRRC1Q96M27 445 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 MCHR1Q99705 422 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 FNDC11Q9BVV2 318 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 CDCP1Q9H5V8 836 aa15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 TESQ9UGI8 421 aaKnown RBP15.75■□□□□ 0.11
CCDC28B-202ENST00000421922 J3KTA2 159 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms