RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 OR8H2Q8N162 312 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 OR2L13Q8N349 312 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 GPBAR1Q8TDU6 330 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 ACOT11Q8WXI4 607 aaPredicted RBP10.19□□□□□ -0.78
DDX56-203ENST00000421223 TP53INP1Q96A56 240 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 TGM7Q96PF1 710 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 PSD2Q9BQI7 771 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 POLDIP3Q9BY77 421 aaKnown RBP10.19□□□□□ -0.78
DDX56-203ENST00000421223 TBC1D17Q9HA65 648 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 ERVK13-1Q9NX77 482 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 NDOR1Q9UHB4 597 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 HS3ST3A1Q9Y663 406 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 MTCH2Q9Y6C9 303 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 GALR3O60755 368 aaPredicted RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 SERPINI2O75830 405 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 UBXN7O94888 489 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CDRT1O95170 752 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 RAB36O95755 333 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 ENPP1P22413 925 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 ALAS2P22557 587 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 RPS19P39019 145 aaKnown RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 GCGRP47871 477 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CAV3P56539 151 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 BTG2P78543 158 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 TSPAN31Q12999 210 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CBX3Q13185 183 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 NCF4Q15080 339 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 DEFB133Q30KQ1 61 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 ZNF791Q3KP31 576 aaPredicted RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 NKAIN2Q5VXU1 208 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 MCATQ8IVS2 390 aaKnown RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 PRSS58Q8IYP2 241 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CA13Q8N1Q1 262 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CAMKK1Q8N5S9 505 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 OR4Q3Q8NH05 313 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 SLC38A3Q99624 504 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 ARHGDIGQ99819 225 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 TTTY10Q9BZA0 68 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 OR51V1Q9H2C8 321 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 C20orf141Q9NUB4 165 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 PCDHGA3Q9Y5H0 932 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 SLC35F4A4IF30 521 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 OR5K3A6NET4 321 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 SOCS6O14544 535 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 PLD2O14939 933 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 TNFSF14O43557 240 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CLEC2LP0C7M8 214 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 SMIM10L1P0DMW3 83 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CD40LGP29965 261 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 PRKAR1BP31321 381 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 SLC15A1P46059 708 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CDK5Q00535 292 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 FLYWCH1Q4VC44 716 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CRTC2Q53ET0 693 aaPredicted RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 SPANXN2Q5MJ10 180 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 PDZK1Q5T2W1 519 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 ABI3BPQ7Z7G0 1075 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 RANBP3LQ86VV4 465 aaPredicted RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 ATCAYQ86WG3 371 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 CPOQ8IVL8 374 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 GATSQ8NAP1 163 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 OR51G2Q8NGK0 314 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 SMAP2Q8WU79 429 aaPredicted RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 DNAJA3Q96EY1 480 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 MMABQ96EY8 250 aaPredicted RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 SMIM10Q96HG1 83 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 LRRC61Q9BV99 259 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 TEX12Q9BXU0 123 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 ENKD1Q9H0I2 346 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 PIGUQ9H490 435 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 NLGN3Q9NZ94 848 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 KCNE5Q9UJ90 142 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 SSR3Q9UNL2 185 aa10.18□□□□□ -0.78
DDX56-203ENST00000421223 C19orf53Q9UNZ5 99 aaPredicted RBP10.18□□□□□ -0.78
DDX56-203ENST00000421223 AGAP5A6NIR3 686 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SYT5O00445 386 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 CYR61O00622 381 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 ASNA1O43681 348 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 OMPP47874 163 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 PPP5CP53041 499 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 POU6F2P78424 691 aaPredicted RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 CSTF1Q05048 431 aaKnown RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 OR1Q1Q15612 314 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 NDUFAF6Q330K2 333 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 ARHGAP11BQ3KRB8 267 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 ZNF628Q5EBL2 1059 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 PLBD1Q6P4A8 553 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SLC36A4Q6YBV0 504 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 LAPTM4BQ86VI4 370 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 VWA5B2Q8N398 1253 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 FAM26EQ8N5C1 309 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 NANOGP1Q8N7R0 232 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 TMEM163Q8TC26 289 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 CNOT9Q92600 299 aaKnown RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 TMED9Q9BVK6 235 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 PTGFRNQ9P2B2 879 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 ENTPD2Q9Y5L3 495 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 ARID1BQ8NFD5 2236 aaPredicted RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 TRAV27A0A087WT01 109 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 KIR2DS5A0A0G2JLQ3 304 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms