RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 OR51J1Q9H342 316 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 CXorf36Q9H7Y0 433 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 MIEF1Q9NQG6 463 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 GKN1Q9NS71 199 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 AKAP7Q9P0M2 348 aaPredicted RBP6.56□□□□□ -1.36
TVP23C-202ENST00000419890 EXTL2Q9UBQ6 330 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 SEC14L3Q9UDX4 400 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 LSM7Q9UK45 103 aaKnown RBP6.56□□□□□ -1.36
TVP23C-202ENST00000419890 ADAM29Q9UKF5 820 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 MAFFQ9ULX9 164 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 ENTPD4Q9Y227 616 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 NPFFR2Q9Y5X5 522 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 HCFC2Q9Y5Z7 792 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 IRAK3Q9Y616 596 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 SESN1Q9Y6P5 492 aa6.56□□□□□ -1.36
TVP23C-202ENST00000419890 CCDC88CQ9P219 2028 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 DENND4CQ5VZ89 1909 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 MTCL1Q9Y4B5 1905 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TRAV19A0A0A6YYK7 116 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 LOC102723532A0A0G2JNH3 316 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 OR6C65A6NJZ3 312 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 KRBOX1C9JBD0 128 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TRIM77I1YAP6 450 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 GTPBP1O00178 669 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 GREM1O60565 184 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SEMA7AO75326 666 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 ZNF821O75541 412 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TSPAN9O75954 239 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 UBL3O95164 117 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 POP4O95707 220 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TGM6O95932 706 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 EFEMP2O95967 443 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 HMGN1P05114 100 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 CD1AP06126 327 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 EPHX1P07099 455 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SAGP10523 405 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 CPN1P15169 458 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 RPL17P18621 184 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 DNASE1P24855 282 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 FPR3P25089 353 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 VIPR1P32241 457 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 FEN1P39748 380 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TGM4P49221 684 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 AGFG1P52594 562 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 CDH11P55287 796 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TAS2R50P59544 299 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 RPS7P62081 194 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SNRPD2P62316 118 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TBPL1P62380 186 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SMAD4Q13485 552 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 EXOSC2Q13868 293 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 GALEQ14376 348 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 NTRK2Q16620 822 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 MSMPQ1L6U9 139 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 ZNF284Q2VY69 593 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 ELFN2Q5R3F8 820 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 AADACL4Q5VUY2 407 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TYW3Q6IPR3 259 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 C22orf39Q6P5X5 142 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 PODNL1Q6PEZ8 512 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TMEM65Q6PI78 240 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 PRSS55Q6UWB4 352 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 NXPE4Q6UWF7 544 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SEZ6L2Q6UXD5 910 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TMEM184AQ6ZMB5 413 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 DEF8Q6ZN54 512 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 RTL4Q6ZR62 310 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 ZER1Q7Z7L7 766 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SLC9B2Q86UD5 537 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 OR8H3Q8N146 312 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SLC43A2Q8N370 569 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 RNF175Q8N4F7 328 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 ZNF655Q8N720 491 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 HORMAD2Q8N7B1 307 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 C12orf76Q8N812 135 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TP53I13Q8NBR0 393 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 FAM71CQ8NEG0 241 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 GPR156Q8NFN8 814 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 OR56B4Q8NH76 319 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SUN3Q8TAQ9 357 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 SLC5A11Q8WWX8 675 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 OSTF1Q92882 214 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 CIDECQ96AQ7 238 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 PHF21AQ96BD5 680 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 KLHDC7BQ96G42 594 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 AHCYL2Q96HN2 611 aaKnown RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 ZNF649Q9BS31 505 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 THAP7Q9BT49 309 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 MRI1Q9BV20 369 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 HDHD2Q9H0R4 259 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 RHBGQ9H310 441 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 PELI2Q9HAT8 420 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 PLEKHA1Q9HB21 404 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 KRCC1Q9NPI7 259 aaPredicted RBP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 TRIM36Q9NQ86 728 aa6.55□□□□□ -1.36
TVP23C-202ENST00000419890 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.55□□□□□ -1.36
TVP23C-202ENST00000419890 MAN2C1Q9NTJ4 1040 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms