RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CNR1P21554 472 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ARRB2P32121 409 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SERPINB5P36952 375 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 PIGAP37287 484 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 GZMKP49863 264 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CASP6P55212 293 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FBXW4P57775 412 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 PPIAP62937 165 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 RPL38P63173 70 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 PLGLB1Q02325 96 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 C2orf80Q0P641 193 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FOXO1Q12778 655 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 RAB39AQ14964 217 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 EXOSC7Q15024 291 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 KIAA0040Q15053 153 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 RPS6KA2Q15349 733 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 NNATQ16517 81 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 C3AR1Q16581 482 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 NTRK2Q16620 822 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 TRMT12Q53H54 448 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 TNFAIP8L3Q5GJ75 292 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SH2D4BQ5SQS7 431 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CEP85LQ5SZL2 805 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 PRAMEF20Q5VT98 475 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FAM71E1Q6IPT2 247 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 NOXRED1Q6NXP6 359 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 TMEM64Q6YI46 380 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 Q6ZPB1 254 aaPredicted RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 RGS9BPQ6ZS82 235 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 Q6ZSR9 355 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 IKBIPQ70UQ0 350 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 EXOC3L1Q86VI1 746 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 TICAM1Q8IUC6 712 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SAMD14Q8IZD0 417 aaPredicted RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FAM9CQ8IZT9 166 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FBXW8Q8N3Y1 598 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FAM156AQ8NDB6 213 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 OR52R1Q8NGF1 315 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 OR52N2Q8NGI0 321 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FAM76AQ8TAV0 307 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 AGR3Q8TD06 166 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 TWIST2Q8WVJ9 160 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ADIPOR1Q96A54 375 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ZBTB9Q96C00 473 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 METTL2AQ96IZ6 378 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FCRL1Q96LA6 429 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CCT7Q99832 543 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FAM173AQ9BQD7 235 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ITPAQ9BY32 194 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 NXF5Q9H1B4 397 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CENPHQ9H3R5 247 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ANKRA2Q9H9E1 313 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SEC61A2Q9H9S3 476 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 IL1RL2Q9HB29 575 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 LRTM1Q9HBL6 345 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 MIEF1Q9NQG6 463 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SLC35C2Q9NQQ7 365 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 GIMAP4Q9NUV9 329 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 C1orf109Q9NX04 203 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 TUBA8Q9NY65 449 aaPredicted RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CNIH4Q9P003 139 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 BCAP29Q9UHQ4 241 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF639Q9UID6 485 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 TINAGQ9UJW2 476 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CNOT11Q9UKZ1 510 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 EXO1Q9UQ84 846 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CFL2Q9Y281 166 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 WBP11Q9Y2W2 641 aaKnown RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CHCHD2Q9Y6H1 151 aaPredicted RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 EXPH5Q8NEV8 1989 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 NAV2Q8IVL1 2488 aa6.34□□□□□ -1.4
HMGN1-205ENST00000419378 EML6Q6ZMW3 1958 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF407Q9C0G0 2248 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 A0A1B0GTH9 108 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 LRRC3CA6NJW4 275 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 CYSRT1A8MQ03 144 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 CCL21O00585 134 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PIP5K1BO14986 540 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 LSM1O15116 133 aaKnown RBP6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ACOX3O15254 700 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 CTIFO43310 598 aaKnown RBP6.33□□□□□ -1.4
HMGN1-205ENST00000419378 LRATO95237 230 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 CLDN1O95832 211 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 LINC00032P0C843 101 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 RHCEP18577 417 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 SDC1P18827 310 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ABCD3P28288 659 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 TMED10P49755 219 aaKnown RBP6.33□□□□□ -1.4
HMGN1-205ENST00000419378 EMDP50402 254 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 NCBP2P52298 156 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGN1-205ENST00000419378 KCNJ2P63252 427 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 HYAL4Q2M3T9 481 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 UGT3A2Q3SY77 523 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 XKR7Q5GH72 579 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 CES4AQ5XG92 561 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 SLC22A10Q63ZE4 541 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 HIST2H2BCQ6DN03 193 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PPP4R4Q6NUP7 873 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ARHGAP11AQ6P4F7 1023 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 MYO7BQ6PIF6 2116 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms