RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 KLHL25Q9H0H3 589 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PRO3102Q9H379 93 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SYNDIG1Q9H7V2 258 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ANKRA2Q9H9E1 313 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PDE7BQ9NP56 450 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PRODH2Q9UF12 536 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KLHL3Q9UH77 587 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC7A7Q9UM01 511 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MMACHCQ9Y4U1 282 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 UGT2A1Q9Y4X1 527 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SURF4O15260 269 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 AQP9O43315 295 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KCNK2O95069 426 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MED26O95402 600 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MSL3P1P0C860 447 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CPEP16870 476 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GALP22466 123 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GABRA3P34903 492 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ACSM1Q08AH1 577 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC13A2Q13183 592 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 INAQ16352 499 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 C14orf28Q4W4Y0 310 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DCDC5Q6ZRR9 648 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DGLUCYQ7Z3D6 616 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SPEM1Q8N4L4 309 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TMEM52Q8NDY8 209 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR52I1Q8NGK6 324 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR9A4Q8NGU2 314 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TMEM239Q8WW34 195 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 VSTM2LQ96N03 204 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DGAT2Q96PD7 388 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR1F2PQ96R84 312 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR5M11Q96RB7 305 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPA33Q99795 319 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MROQ9BYG7 248 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PLA2G12AQ9BZM1 189 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FOLH1BQ9HBA9 442 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FAM60AQ9NP50 221 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PRTFDC1Q9NRG1 225 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 INPP5EQ9NRR6 644 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GMEB2Q9UKD1 530 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC6A14Q9UN76 642 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MED31Q9Y3C7 131 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PMF1-BGLAPU3KQ54 211 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 COL5A1P20908 1838 aaPredicted RBP13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TDRD6O60522 2096 aaKnown RBP13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC9B1P1A6NJY1 282 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HRO43593 1189 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DYRK3O43781 588 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SNX4O95219 450 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IGF2P01344 180 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OCM2P0CE71 109 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OCMP0CE72 109 aaPredicted RBP13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HTR1FP30939 366 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LCN1P31025 176 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GCGRP47871 477 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CDH11P55287 796 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 NXPH1P58417 271 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PSPHP78330 225 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 BDH1Q02338 343 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 C1orf61Q13536 156 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR1Q1Q15612 314 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF141Q15928 474 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF181Q2M3W8 571 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF542PQ5EBM4 170 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 YOD1Q5VVQ6 348 aaPredicted RBP13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OLIG3Q7RTU3 272 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PRICKLE2Q7Z3G6 844 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 NKAIN4Q8IVV8 208 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IQCF1Q8N6M8 205 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR52R1Q8NGF1 315 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CHCHD6Q9BRQ6 235 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF426Q9BUY5 554 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 EGLN3Q9H6Z9 239 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HHATLQ9HCP6 504 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CNIH4Q9P003 139 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SSR3Q9UNL2 185 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CSNK1G3Q9Y6M4 447 aa13.5□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TP53BP1Q12888 1972 aaPredicted RBP13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LOC100506127A0A0U1RQW1 187 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 UNC119BA6NIH7 251 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 EFCAB7A8K855 629 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF670-ZNF695F2Z2N8 137 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FRS3O43559 492 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPR3P46089 330 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GABRA4P48169 554 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MAZP56270 477 aaKnown RBP13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PSG6Q00889 435 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FUT7Q11130 342 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GAS6Q14393 721 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 AMZ1Q400G9 498 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 AADACL4Q5VUY2 407 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KMT5CQ86Y97 462 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLITRK4Q8IW52 837 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR8D4Q8NGM9 314 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms