RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CASP3P42574 277 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 TNFSF10P50591 281 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 RNF144AP50876 292 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 GPR85P60893 370 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 FUT5Q11128 374 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SNTA1Q13424 505 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 VEZF1Q14119 521 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 EXOSC6Q5RKV6 272 aaKnown RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF468Q5VIY5 522 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 GLYATQ6IB77 296 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 C8orf82Q6P1X6 216 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 EIF3MQ7L2H7 374 aaKnown RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 GALNTL5Q7Z4T8 443 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 CALHM3Q86XJ0 350 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 PTOV1Q86YD1 416 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 MISPQ8IVT2 679 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 C10orf111Q8N326 155 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 FAM156AQ8NDB6 213 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 BHLHE22Q8NFJ8 381 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 FAM110BQ8TC76 370 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 PAQR8Q8TEZ7 354 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 PROX1Q92786 737 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 HGDQ93099 445 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SLC7A6OSQ96CW6 309 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SH3YL1Q96HL8 342 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 TPD52L3Q96J77 140 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 NSMCE2Q96MF7 247 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 RNF145Q96MT1 663 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 FAM173AQ9BQD7 235 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 QRSL1Q9H0R6 528 aaKnown RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SLC38A1Q9H2H9 487 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 LRMDAQ9H2I8 198 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 MUC13Q9H3R2 512 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 RUBCNLQ9H714 662 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 FBXO34Q9NWN3 711 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SUCOQ9UBS9 1254 aaKnown RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 RPS6KA6Q9UK32 745 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 DKKL1Q9UK85 242 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 USP22Q9UPT9 525 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF443Q9Y2A4 671 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SLC35A3Q9Y2D2 325 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 WIF1Q9Y5W5 379 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SNX13Q9Y5W8 968 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 CEP295Q9C0D2 2601 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 FREM2Q5SZK8 3169 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 SERINC4A6NH21 518 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 HCRTR2O43614 444 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 PEX1O43933 1283 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 NME2P1O60361 137 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 ANGPTL1O95841 491 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 OPN1SWP03999 348 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 PABPC4LP0CB38 370 aaKnown RBP7.76□□□□□ -1.17
TRIM48-201ENST00000417545 ETS2P15036 469 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 NCK1P16333 377 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 CNR1P21554 472 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 NME2P22392 152 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 GCKP35557 465 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 DNASE1L1P49184 302 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 MEOX1P50221 254 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 C17orf67Q0P5P2 114 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 ZSWIM7Q19AV6 140 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 LINC00303Q3SY05 128 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 BICRALQ6AI39 1079 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 DESI1Q6ICB0 168 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 IGFL2Q6UWQ7 119 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 LYPD8Q6UX82 237 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 IGFL3Q6UXB1 125 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 FKBP9P1Q75LS8 142 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 MDGA2Q7Z553 956 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 ZAR1Q86SH2 424 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 MARCH3Q86UD3 253 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 DHFR2Q86XF0 187 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 ULK2Q8IYT8 1036 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 POGLUT1Q8NBL1 392 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 CATSPER1Q8NEC5 780 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 TOR1AIP2Q8NFQ8 470 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 OR1J4Q8NGS1 313 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 GRHL3Q8TE85 626 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 OIT3Q8WWZ8 545 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 CLPTM1LQ96KA5 538 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 SLC25A18Q9H1K4 315 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 MMADHCQ9H3L0 296 aaPredicted RBP7.76□□□□□ -1.17
TRIM48-201ENST00000417545 PTGES2Q9H7Z7 377 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 GALNT9Q9HCQ5 603 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 BCL2L10Q9HD36 194 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 BAG5Q9UL15 447 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 SAMD4AQ9UPU9 718 aaKnown RBP7.76□□□□□ -1.17
TRIM48-201ENST00000417545 B3GNT3Q9Y2A9 372 aa7.76□□□□□ -1.17
TRIM48-201ENST00000417545 CHCHD2Q9Y6H1 151 aaPredicted RBP7.76□□□□□ -1.17
TRIM48-201ENST00000417545 FRYQ5TBA9 3013 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 A0A1W2PQD3 144 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 PRAMEF27A3QJZ7 478 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 AGAP5A6NIR3 686 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 EIF4E1BA6NMX2 242 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ALG1L2C9J202 215 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 M0QX08 132 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 TFECO14948 347 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ARPC2O15144 300 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 GSC2O15499 205 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF264O43296 627 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms