RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 MED12LQ86YW9 2145 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 SLC22A20A6NK97 555 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 SHISA8B8ZZ34 492 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-210ENST00000416778 HPCAL1P37235 193 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 KIR2DL2P43627 348 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-210ENST00000416778 SERPINB4P48594 390 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 CCT3P49368 545 aaKnown RBP16.1■□□□□ 0.17
CPNE1-210ENST00000416778 PRIM2P49643 509 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 ART1P52961 327 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 OCRLQ01968 901 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 EMX2Q04743 252 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 OR2A2Q6IF42 318 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 BTLAQ7Z6A9 289 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 NATD1Q8N6N6 113 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 FNDC5Q8NAU1 212 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 OTUB1Q96FW1 271 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-210ENST00000416778 DACH2Q96NX9 599 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 BTBD2Q9BX70 525 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 C20orf27Q9GZN8 174 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 PIGUQ9H490 435 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 DUSP22Q9NRW4 184 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 GALNT8Q9NY28 637 aa16.1■□□□□ 0.17
CPNE1-210ENST00000416778 PRRC2AP48634 2157 aaKnown RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 WDR91A4D1P6 747 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 H3BML4 177 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 MSTNO14793 375 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 GMFGO60234 142 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 SKAP2O75563 359 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 G6PDP11413 515 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 PRPS1L1P21108 318 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 PCYT1AP49585 367 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 MPP2Q14168 576 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 LSM12Q3MHD2 195 aaKnown RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 TNFAIP8L3Q5GJ75 292 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 CCNJQ5T5M9 372 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 SZRD1Q7Z422 152 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 P4HA3Q7Z4N8 544 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 ACTRT2Q8TDY3 377 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 NINJ1Q92982 152 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 TUBGCP3Q96CW5 907 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 ZNF845Q96IR2 970 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 STACQ99469 402 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 PRPF18Q99633 342 aaKnown RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 NPAS1Q99742 590 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 KLHDC3Q9BQ90 382 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 PINK1Q9BXM7 581 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 CXorf36Q9H7Y0 433 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 HHATLQ9HCP6 504 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 SSU72Q9NP77 194 aaKnown RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 ZCCHC3Q9NUD5 404 aaKnown RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 CCM2LQ9NUG4 571 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 ST6GALNAC2Q9UJ37 374 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 PACSIN3Q9UKS6 424 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 RAB21Q9UL25 225 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 EIF3LQ9Y262 564 aaKnown RBP16.09■□□□□ 0.17
CPNE1-210ENST00000416778 ZNF175Q9Y473 711 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 SNX8Q9Y5X2 465 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 KCNE3Q9Y6H6 103 aa16.09■□□□□ 0.17
CPNE1-210ENST00000416778 MTORP42345 2549 aa16.08■□□□□ 0.17
CPNE1-210ENST00000416778 SETD2Q9BYW2 2564 aaPredicted RBP16.08■□□□□ 0.17
CPNE1-210ENST00000416778 A0A087WZY1 265 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 BIRC5O15392 142 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 RGS16O15492 202 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-210ENST00000416778 HSPA4LO95757 839 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 C6orf47O95873 294 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 CGAP01215 116 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 DHRS4L1P0CG22 281 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 CD1EP15812 388 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 PSMA4P25789 261 aaKnown RBP16.08■□□□□ 0.16
CPNE1-210ENST00000416778 CLDN8P56748 225 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 C21orf58P58505 322 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 POU6F2P78424 691 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-210ENST00000416778 FAM27E3Q08E93 113 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 LASP1Q14847 261 aaKnown RBP16.08■□□□□ 0.16
CPNE1-210ENST00000416778 SMU1Q2TAY7 513 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 KRT71Q3SY84 523 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 CDC73Q6P1J9 531 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 VWA1Q6PCB0 445 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 ZNF474Q6S9Z5 364 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-210ENST00000416778 GGNQ86UU5 652 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 METTL25Q8N6Q8 603 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 COX18Q8N8Q8 333 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 GATSQ8NAP1 163 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 FNDC9Q8TBE3 224 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 CDS1Q92903 461 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 PGM2Q96G03 612 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 FOXC2Q99958 501 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 ACTRT3Q9BYD9 372 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 BHLHE41Q9C0J9 482 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-210ENST00000416778 CXXC4Q9H2H0 198 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 RNF122Q9H9V4 155 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 ATAD3AQ9NVI7 634 aa16.08■□□□□ 0.16
CPNE1-210ENST00000416778 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-210ENST00000416778 A0A1W2PQD3 144 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 SEC14L5O43304 696 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 SOX30O94993 753 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 SERPINE1P05121 402 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms