RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 VASNQ6EMK4 673 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 TMEM211Q6ICI0 200 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 ZNF585AQ6P3V2 769 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 TNFAIP8L2Q6P589 184 aaPredicted RBP16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 BLOC1S3Q6QNY0 202 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 MAMDC2Q7Z304 686 aaPredicted RBP16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 PM20D2Q8IYS1 436 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 XAGE5Q8WWM1 108 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 VPS33AQ96AX1 596 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 RTN4RQ9BZR6 473 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 FGFR1OP2Q9NVK5 253 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 CCDC167Q9P0B6 97 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 SLC6A5Q9Y345 797 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 NOTCH2Q04721 2471 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 A1L4Q6 167 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 C17orf51A8MQB3 221 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 H3BNH8 94 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 NR5A2O00482 541 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 STX11O75558 287 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 GSNP06396 782 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 OR12D1P0DN82 309 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 NCF2P19878 526 aaPredicted RBP16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 MSX1P28360 303 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 PTGER4P35408 488 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 MDH1P40925 334 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 ATP12AP54707 1039 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 CASP9P55211 416 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 METTL21CQ5VZV1 264 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 HEPHL1Q6MZM0 1159 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 AAGABQ6PD74 315 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 DNAJC14Q6Y2X3 702 aaPredicted RBP16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 RNF130Q86XS8 419 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 ZNF808Q8N4W9 903 aaPredicted RBP16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 ABTB1Q969K4 478 aaPredicted RBP16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 SPDL1Q96EA4 605 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 TIMP4Q99727 224 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 NMUR2Q9GZQ4 415 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 POLE3Q9NRF9 147 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 MED11Q9P086 117 aa16.36■□□□□ 0.21
SEMA3B-201ENST00000416295 ZNF407Q9C0G0 2248 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 NCKAP5O14513 1909 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 B4DXG7 233 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 GUSBP08236 651 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 BMP7P18075 431 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 AGAP20933 346 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 ADORA2A-AS1P86434 159 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 SF3B4Q15427 424 aaKnown RBP eCLIP16.35■□□□□ 0.216e-8■■■□□ 17.1
SEMA3B-201ENST00000416295 ZNF630Q2M218 657 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 AGKQ53H12 422 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 XKRXQ6PP77 449 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 ENPP6Q6UWR7 440 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 B3GNT6Q6ZMB0 384 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 MTERF4Q7Z6M4 381 aaKnown RBP16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 MRGPRGQ86SM5 289 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 FUNDC1Q8IVP5 155 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 GATSQ8NAP1 163 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 ITLN2Q8WWU7 325 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 OIT3Q8WWZ8 545 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 GTF2H4Q92759 462 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 RAB8BQ92930 207 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 C1GALT1C1Q96EU7 318 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 SFXN2Q96NB2 322 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 TMEM120AQ9BXJ8 343 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 UGT2B28Q9BY64 529 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 PRDM14Q9GZV8 571 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 ZNF350Q9GZX5 532 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 MRGBPQ9NV56 204 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 ALKBH4Q9NXW9 302 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 LIPT1Q9Y234 373 aa16.35■□□□□ 0.21
SEMA3B-201ENST00000416295 AHRRA9YTQ3 701 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 NPIPB9F8W1W9 429 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 HMGN4O00479 90 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 ZIC3O60481 467 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 CHMP24386 653 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 GFRA1P56159 465 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 HPCAP84074 193 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 GLYR1Q49A26 553 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 KLHL26Q53HC5 615 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 C1orf185Q5T7R7 199 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 SLC2A7Q6PXP3 512 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 ULK2Q8IYT8 1036 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 PNPT1Q8TCS8 783 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 PHOSPHO1Q8TCT1 267 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 ZFP90Q8TF47 636 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 ROPN1LQ96C74 230 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 SLC6A13Q9NSD5 602 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 CAMK2AQ9UQM7 478 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 RPH3AQ9Y2J0 694 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 WDR45Q9Y484 360 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 DTNAQ9Y4J8 743 aa16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 NUP214P35658 2090 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-201ENST00000416295 GTF3C1Q12789 2109 aa16.33■□□□□ 0.21
SEMA3B-201ENST00000416295 A0A087WZY1 265 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 A0A096LPI6 279 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 NPIPA5A0A0B4J1W7 369 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 FAM47E-STBD1D6RA91 191 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 NPIPA7E9PJI5 369 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 LINC01387J3KSC0 135 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 NPIPA8P0DM63 369 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 HK1P19367 917 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms