RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 PKLRP30613 574 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ATP6V1E1P36543 226 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ATP12AP54707 1039 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ERVK-21P61565 698 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 NTHL1P78549 312 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 GPR176Q14439 515 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ZNF234Q14588 700 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 DEFB115Q30KQ5 88 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ZNF750Q32MQ0 723 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 PIP5KL1Q5T9C9 394 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ZNF57Q68EA5 555 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 SLC30A6Q6NXT4 461 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 PLEKHM3Q6ZWE6 761 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 C16orf62Q7Z3J2 963 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 GDF7Q7Z4P5 450 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 TPRA1Q86W33 373 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ACBD7Q8N6N7 88 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 OR5M3Q8NGP4 307 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 OR8K5Q8NH50 307 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ANGPTL6Q8NI99 470 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 BRIX1Q8TDN6 353 aaKnown RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 HSD17B8Q92506 261 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ZG16BQ96DA0 208 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 SLC41A3Q96GZ6 507 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 CCDC120Q96HB5 630 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 AHCYL2Q96HN2 611 aaKnown RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 HYLS1Q96M11 299 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 C12orf66Q96MD2 445 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 MCHR1Q99705 422 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 LGR4Q9BXB1 951 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 POLMQ9NP87 494 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 ATP13A2Q9NQ11 1180 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 INPP5EQ9NRR6 644 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 LYARQ9NX58 379 aaKnown RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 GPR55Q9Y2T6 319 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 ZNF780BQ9Y6R6 833 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 NOTCH4Q99466 2003 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TBC1D3KA0A087X1G2 549 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CIB4A0PJX0 185 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TBC1D3BA6NDS4 549 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TBC1D3FA6NER0 549 aaPredicted RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 INMT-MINDY4F8WBC2 141 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 PCCBP05166 539 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 POU2F2P09086 479 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CEBPBP17676 345 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 HK1P19367 917 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TBXA2RP21731 343 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CAPZA2P47755 286 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 SRP9P49458 86 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 RGS8P57771 180 aaPredicted RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 CSTF1Q05048 431 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 DUSP2Q05923 314 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 MLF2Q15773 248 aaPredicted RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 TCEAL5Q5H9L2 206 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TOR2AQ5JU69 321 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 FAM27D1Q5T7N8 215 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 HBMQ6B0K9 141 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TBC1D3GQ6DHY5 549 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 GRASPQ7Z6J2 395 aaPredicted RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 NKAIN4Q8IVV8 208 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 RNF113BQ8IZP6 322 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 OR11H7Q8NGC8 314 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 GANCQ8TET4 914 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 AKAP1Q92667 903 aaKnown RBP eCLIP9.13□□□□□ -0.95
CD44-206ENST00000415148 GIMAP5Q96F15 307 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 ART5Q96L15 291 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.13□□□□□ -0.95
CD44-206ENST00000415148 ISG20L2Q9H9L3 353 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 SLC28A3Q9HAS3 691 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CACYBPQ9HB71 228 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 SLCO1C1Q9NYB5 712 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 PTGFRNQ9P2B2 879 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 HEATR5BQ9P2D3 2071 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TRAV6A0A075B6T7 132 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TIMP1P01033 207 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CSF2RAP15509 400 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 ZNF250P15622 560 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 SLC6A1P30531 599 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 BTCP35070 178 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TALDO1P37837 337 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 STXBP1P61764 594 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 MRPL28Q13084 256 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 ANGPT1Q15389 498 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 RNASE12Q5GAN4 147 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 C6orf132Q5T0Z8 1188 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 BCL2L15Q5TBC7 163 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CDC73Q6P1J9 531 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 SMARCD3Q6STE5 483 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 MEPCEQ7L2J0 689 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 CXXC5Q7LFL8 322 aaKnown RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 ADGRD2Q7Z7M1 963 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 NRROSQ86YC3 692 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 KLBQ86Z14 1044 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 CCDC28AQ8IWP9 274 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 NRMQ8IXM6 262 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 SAMD14Q8IZD0 417 aaPredicted RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 GHDCQ8N2G8 530 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms