RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 KCNK2O95069 426 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 CRHP06850 196 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 ALOX5P09917 674 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 POU2F1P14859 743 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 CREB1P16220 341 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 ARRB2P32121 409 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 CCKARP32238 428 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 HPCAL1P37235 193 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 ASMTP46597 345 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 EIF1AXP47813 144 aaKnown RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 KCNJ5P48544 419 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 RPS3AP61247 264 aaKnown RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 EEF1A1P68104 462 aaKnown RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 LASP1Q14847 261 aaKnown RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 DEFB113Q30KQ7 82 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 UGT3A2Q3SY77 523 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 EEF1A1P5Q5VTE0 462 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 ZNF550Q7Z398 422 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 GGNQ86UU5 652 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 RIBC1Q8N443 379 aaPredicted RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 METTL25Q8N6Q8 603 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 NUDT8Q8WV74 236 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 FAM120BQ96EK7 910 aaKnown RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 ALPK1Q96QP1 1244 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 KLHDC3Q9BQ90 382 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 RNF122Q9H9V4 155 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 EML4Q9HC35 981 aaKnown RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 ACSS1Q9NUB1 689 aaPredicted RBP13.98□□□□□ -0.17
ACTB-202ENST00000414620 NDRG3Q9UGV2 375 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 CLEC4AQ9UMR7 237 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 SNX8Q9Y5X2 465 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 AP4B1Q9Y6B7 739 aa13.98□□□□□ -0.17
ACTB-202ENST00000414620 UQCRHLA0A096LP55 91 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 NPIPA5A0A0B4J1W7 369 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 NPIPA7E9PJI5 369 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 LINC01387J3KSC0 135 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 AQP8O94778 261 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 GOSR1O95249 250 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 SLU7O95391 586 aaKnown RBP13.97□□□□□ -0.17
ACTB-202ENST00000414620 FGF4P08620 206 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 NUDT17P0C025 328 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 NPIPA8P0DM63 369 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 HPGDP15428 266 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 CD79BP40259 229 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 SLC6A8P48029 635 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 PRIM2P49643 509 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 PTGR1Q14914 329 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 TMEM44Q2T9K0 475 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 GLYR1Q49A26 553 aaPredicted RBP13.97□□□□□ -0.17
ACTB-202ENST00000414620 R3HCC1LQ7Z5L2 792 aaKnown RBP13.97□□□□□ -0.17
ACTB-202ENST00000414620 CAMKMTQ7Z624 323 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 OR6Y1Q8NGX8 325 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.97□□□□□ -0.172e-10■■■■■ 70.2
ACTB-202ENST00000414620 CDS1Q92903 461 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 MBD6Q96DN6 1003 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 MTERF3Q96E29 417 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 ZC3HAV1LQ96H79 300 aaKnown RBP13.97□□□□□ -0.17
ACTB-202ENST00000414620 PPP3R2Q96LZ3 170 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 C3orf30Q96M34 536 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 WFIKKN1Q96NZ8 548 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 PRRG4Q9BZD6 226 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 TMEM185BQ9H7F4 350 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 GIN1Q9NXP7 522 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 NTMQ9P121 344 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 LGALS13Q9UHV8 139 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 ATP6V1HQ9UI12 483 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 PROCRQ9UNN8 238 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 EIF3LQ9Y262 564 aaKnown RBP13.97□□□□□ -0.17
ACTB-202ENST00000414620 ZNF175Q9Y473 711 aa13.97□□□□□ -0.17
ACTB-202ENST00000414620 RAI1Q7Z5J4 1906 aaPredicted RBP13.97□□□□□ -0.17
ACTB-202ENST00000414620 A0A1W2PRB8 838 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 TMEM114B3SHH9 223 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 SCDO00767 359 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 SIAH2O43255 324 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 HMGN2P05204 90 aaKnown RBP13.96□□□□□ -0.17
ACTB-202ENST00000414620 LAMP1P11279 417 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 TBXA2RP21731 343 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 MAPK1P28482 360 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 ZNF41P51814 821 aaPredicted RBP13.96□□□□□ -0.17
ACTB-202ENST00000414620 ADAM8P78325 824 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 POU6F2P78424 691 aaPredicted RBP13.96□□□□□ -0.17
ACTB-202ENST00000414620 TP53BP2Q13625 1128 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 CD226Q15762 336 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.96□□□□□ -0.171e-17■■□□□ 12.5
ACTB-202ENST00000414620 EXOC3L2Q2M3D2 409 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 PLPPR5Q32ZL2 321 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 ATP6AP1LQ52LC2 224 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 XKR7Q5GH72 579 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 ZNF610Q8N9Z0 462 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 FNDC5Q8NAU1 212 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 FAM110BQ8TC76 370 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 PIK3IP1Q96FE7 263 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 RNF145Q96MT1 663 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 MED18Q9BUE0 208 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 MED17Q9NVC6 651 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 ZDHHC2Q9UIJ5 367 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 DSCAMO60469 2012 aa13.96□□□□□ -0.17
ACTB-202ENST00000414620 ZNF469Q96JG9 3925 aaPredicted RBP13.96□□□□□ -0.17
ACTB-202ENST00000414620 ITPR3Q14573 2671 aa13.96□□□□□ -0.18
ACTB-202ENST00000414620 TNFSF11O14788 317 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms