RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PRR5LQ6MZQ0 368 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 LEG1Q6P5S2 330 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 PAQR9Q6ZVX9 377 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 TAF8Q7Z7C8 310 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 OR4F17Q8NGA8 305 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 DQX1Q8TE96 717 aaKnown RBP2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 C11orf24Q96F05 449 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 SERAC1Q96JX3 654 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 OR4F4Q96R69 305 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 APOOQ9BUR5 198 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 ATG10Q9H0Y0 220 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 FETUBQ9UGM5 382 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 RSPH14Q9UHP6 348 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 CCPG1Q9ULG6 757 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF490Q9ULM2 529 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 DDX19BQ9UMR2 479 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 CACNA1SQ13698 1873 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 DLEC1Q9Y238 1755 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 QSER1Q2KHR3 1735 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 TIAM2Q8IVF5 1701 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 TRBV7-9A0A0J9YWB2 115 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 CFAP73A6NFT4 308 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 FBLL1A6NHQ2 334 aaKnown RBP2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 EFCAB7A8K855 629 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 E9PMD0 336 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 C11orf98E9PRG8 122 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 SGK494L7N484 410 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 SLC17A2O00624 439 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 SLC4A1P02730 911 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 ALPPP05187 535 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 ALPPL2P10696 532 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 PGAM2P15259 253 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 SFNP31947 248 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 MDH2P40926 338 aaKnown RBP2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 MAGEA9P43362 315 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 ARHGDIBP52566 201 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 MYBPC1Q00872 1141 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 IL9RQ01113 521 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 PARP6Q2NL67 630 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 C2orf66Q6UXQ4 117 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 PRSS48Q7RTY5 328 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 TSEN54Q7Z6J9 526 aaKnown RBP2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 GPBP1Q86WP2 473 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 ERICH1Q86X53 443 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 ITPRIPQ8IWB1 547 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 GPR137CQ8N3F9 429 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF525Q8N782 197 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 OR52J3Q8NH60 311 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 WDR36Q8NI36 951 aaKnown RBP2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 MGARPQ8TDB4 240 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 SPXQ9BT56 116 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 WRAP53Q9BUR4 548 aaKnown RBP2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 DEFB126Q9BYW3 111 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 NACA2Q9H009 215 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 ABCG8Q9H221 673 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 DBNDD1Q9H9R9 158 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 KLF2Q9Y5W3 355 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 TDRD15B5MCY1 1934 aaKnown RBP2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 NRXN2Q9P2S2 1712 aa2.79□□□□□ -1.96
HMGB1P11-201ENST00000413899 TCHHQ07283 1943 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 FOCADQ5VW36 1801 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 A8MX80 341 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 GPAA1O43292 621 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 LCMT2O60294 686 aaKnown RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 RAMP1O60894 148 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 DUSP14O95147 198 aaKnown RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 NDUFA7O95182 113 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 PROS1P07225 676 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 H2AFZP0C0S5 128 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 DNAH10OSP0CZ25 163 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 GHRP10912 638 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 CYP11B1P15538 503 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 STMN1P16949 149 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 GDF1P27539 372 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 PTPN6P29350 595 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 ALDH3B2P48448 385 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 STK19P49842 368 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 HERVK_113P63132 956 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 ERVK-8P63133 956 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 IGLV3-21P80748 117 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 SNX1Q13596 522 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 BTG3Q14201 252 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 EIF2B1Q14232 305 aaKnown RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 SLC10A1Q14973 349 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 CCDC40Q4G0X9 1142 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF530Q6P9A1 599 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 WDR88Q6ZMY6 472 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 VPS36Q86VN1 386 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 Q8N9G6 341 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 NEK11Q8NG66 645 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 RFESDQ8TAC1 157 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 DNAJA3Q96EY1 480 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 NSMCE2Q96MF7 247 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 HCAR1Q9BXC0 346 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 ERVK-6Q9BXR3 956 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 API5Q9BZZ5 524 aaKnown RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 XPO4Q9C0E2 1151 aaKnown RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 OPN3Q9H1Y3 402 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 EXOSC3Q9NQT5 275 aaKnown RBP2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 VNN3Q9NY84 501 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms