RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SOX17Q9H6I2 414 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-202ENST00000413872 INIPQ9NRY2 104 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 DIRAS3O95661 229 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 AIFM1O95831 613 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF16P17020 682 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-202ENST00000413872 POU3F4P49335 361 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 GPLD1P80108 840 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 GPR139Q6DWJ6 353 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 LAS2Q8IYD9 372 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 OR5D16Q8NGK9 328 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 A0A1B0GUL6 1792 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 MAP2K4P45985 399 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 TPMTP51580 245 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 SHISA6Q6ZSJ9 500 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 TRIM43Q96BQ3 446 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 CCNL2Q96S94 520 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 RAB9BQ9NP90 201 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF701Q9NV72 531 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 SLC6A14Q9UN76 642 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 UBALD2Q8IYN6 164 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 IRF2BPLQ9H1B7 796 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 PAPPA2Q9BXP8 1791 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 APLNRP35414 380 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 EXOSC7Q15024 291 aaKnown RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 RAB11BQ15907 218 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 FAM83HQ6ZRV2 1179 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF611Q8N823 705 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 OR5AK2Q8NH90 309 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 KCNIP1Q9NZI2 227 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 KCND3Q9UK17 655 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 RPH3AQ9Y2J0 694 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 RBMX2Q9Y388 322 aaKnown RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 MAGED1Q9Y5V3 778 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 A6NL46 340 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 GTF2F2P13984 249 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 CSNK1A1P48729 337 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 CLEC14AQ86T13 490 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 LGALS12Q96DT0 336 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 FER1L6-AS2Q96M78 137 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 BCL7BQ9BQE9 202 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 FKBP14Q9NWM8 211 aa16.23■□□□□ 0.19
PHRF1-202ENST00000413872 CXXC1Q9P0U4 656 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-202ENST00000413872 SIGLEC6O43699 453 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 CPNE6O95741 557 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SCGB1D2O95969 90 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SRFP11831 508 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 GRPRP30550 384 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 OR8J2Q8NGG1 315 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 AKAP1Q92667 903 aaKnown RBP eCLIP16.22■□□□□ 0.196e-21■□□□□ 9.5
PHRF1-202ENST00000413872 FGF21Q9NSA1 209 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF337Q9Y3M9 751 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 GNAO1P09471 354 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 S100A10P60903 97 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 EEF1A2Q05639 463 aaKnown RBP16.22■□□□□ 0.19
PHRF1-202ENST00000413872 MZT1Q08AG7 82 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SSX6Q7RTT6 188 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 PPP1R35Q8TAP8 253 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ATOH1Q92858 354 aaPredicted RBP16.22■□□□□ 0.19
PHRF1-202ENST00000413872 BPIFA2Q96DR5 249 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF443Q9Y2A4 671 aaPredicted RBP16.22■□□□□ 0.19
PHRF1-202ENST00000413872 TRIM64A6NGJ6 449 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 TNFRSF1BP20333 461 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ADH7P40394 386 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 MAGEA2P43356 314 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 OR1D4P47884 311 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 GPR18Q14330 331 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 C22orf42Q6IC83 251 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 CBLL1Q75N03 491 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SLC35F2Q8IXU6 374 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SLC37A3Q8NCC5 494 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 C1QTNF2Q9BXJ5 285 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SLC6A15Q9H2J7 730 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 GPN2Q9H9Y4 310 aaPredicted RBP16.22■□□□□ 0.19
PHRF1-202ENST00000413872 WBP1LQ9NX94 342 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 LOC102725191A0A1B0GVB3 256 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SYT7O43581 403 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ARAFP10398 606 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 KCNJ10P78508 379 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 RIPPLY1Q0D2K3 151 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 RSU1Q15404 277 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 GDPGP1Q6ZNW5 385 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 CPOQ8IVL8 374 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 MRI1Q9BV20 369 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 MS4A8Q9BY19 250 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 KIR3DX1Q9H7L2 352 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF442Q9H7R0 627 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 TAS2R8Q9NYW2 309 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 IFNA7P01567 189 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 OR7A5Q15622 319 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 C14orf28Q4W4Y0 310 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 HENMT1Q5T8I9 393 aaKnown RBP16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ASRGL1Q7L266 308 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 GTF2H4Q92759 462 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 SLC6A18Q96N87 628 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 ACTR6Q9GZN1 396 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 CHRDQ9H2X0 955 aa16.22■□□□□ 0.19
PHRF1-202ENST00000413872 YES1P07947 543 aa16.21■□□□□ 0.19
PHRF1-202ENST00000413872 S100A1P23297 94 aa16.21■□□□□ 0.19
PHRF1-202ENST00000413872 GCH1P30793 250 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms