RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 GPR87Q9BY21 358 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 FAM117AQ9C073 453 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ASCL3Q9NQ33 180 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 RLIMQ9NVW2 624 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 KLHL28Q9NXS3 571 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 DLL3Q9NYJ7 618 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 FLRT3Q9NZU0 649 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 MRTO4Q9UKD2 239 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 ACAD8Q9UKU7 415 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 CDV3Q9UKY7 258 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 A4GNTQ9UNA3 340 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ZNF232Q9UNY5 417 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 SAMHD1Q9Y3Z3 626 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 FAM32AQ9Y421 112 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 MAGED1Q9Y5V3 778 aaPredicted RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 PCSK5Q92824 1860 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 NSG1A0A0A6YYJ2 146 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 LOC101059948A0A1B0GTJ6 334 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 PCNX2A6NKB5 2137 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 TMEM200CA6NKL6 621 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 TNFRSF11BO00300 401 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 DLGAP1O14490 977 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 SEC16AO15027 2179 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 TPST2O60704 377 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ICOSLGO75144 302 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 GADD45GO95257 159 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 UTS2O95399 124 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 NADKO95544 446 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 OXSR1O95747 527 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 ALPLP05186 524 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 CELA2AP08217 269 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 CYP4B1P13584 511 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 HOXB1P14653 301 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 ACADSP16219 412 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 FUT4P22083 530 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 PTPRBP23467 1997 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 F8A1P23610 371 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ELAVL4P26378 380 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 RBMS1P29558 406 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 OTX2P32243 289 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 KRT20P35900 424 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ALDH3A2P51648 485 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ARHGDIAP52565 204 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ZNF136P52737 540 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 NRG3P56975 720 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 HOXC5Q00444 222 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 PIN1Q13526 163 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 IL10RAQ13651 578 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 DAG1Q14118 895 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 SSPNQ14714 243 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 TAF11Q15544 211 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ZSWIM7Q19AV6 140 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 EXOC3L2Q2M3D2 409 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 BTBD16Q32M84 506 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 CMPK2Q5EBM0 449 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 COLEC12Q5KU26 742 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 OTUD3Q5T2D3 398 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 FNDC7Q5VTL7 733 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 PLAG1Q6DJT9 500 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 NDUFAF7Q7L592 441 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 MRGPREQ86SM8 312 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 STK32CQ86UX6 486 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 RANBP3LQ86VV4 465 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 GRAMD2AQ8IUY3 354 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 CMIPQ8IY22 773 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 OFCC1Q8IZS5 231 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ZNF527Q8NB42 609 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 PIK3C3Q8NEB9 887 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 EXPH5Q8NEV8 1989 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 OR5L2Q8NGL0 311 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 OR4C3Q8NH37 302 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 OR52J3Q8NH60 311 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 M1APQ8TC57 530 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 MAGEE2Q8TD90 523 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 NRBF2Q96F24 287 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 IMMP1LQ96LU5 166 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ADOQ96SZ5 270 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 BARD1Q99728 777 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 RBM4BQ9BQ04 359 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 PSD2Q9BQI7 771 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 RBM4Q9BWF3 364 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 HOXD1Q9GZZ0 328 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ARMC7Q9H6L4 198 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 EVA1AQ9H8M9 152 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 LIN28AQ9H9Z2 209 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 ZNF160Q9HCG1 818 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 MMP25Q9NPA2 562 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 UBQLN4Q9NRR5 601 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 MAN2C1Q9NTJ4 1040 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 ACER3Q9NUN7 267 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 DNAJB12Q9NXW2 375 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 SMPD3Q9NY59 655 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 USE1Q9NZ43 259 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 PDP1Q9P0J1 537 aaPredicted RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 RHCGQ9UBD6 479 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 TESQ9UGI8 421 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 FBXL4Q9UKA2 621 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 FARSAQ9Y285 508 aaKnown RBP6.12□□□□□ -1.43
VPS41-204ENST00000413141 DMXL1Q9Y485 3027 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms