RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 BZW2Q9Y6E2 419 aaKnown RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 RPAP1Q9BWH6 1393 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 AFF2P51816 1311 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 A0A1W2PNV4 684 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF840PA6NDX5 716 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 C12orf71A8MTZ7 269 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 HHLA1C9JL84 531 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PRR23D1E9PI22 279 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 NPIPA7E9PJI5 369 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PSMD11O00231 422 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 EI24O14681 340 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 RRP8O43159 456 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 CHMP2AO43633 222 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 EFNA2O43921 213 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ANGPTL1O95841 491 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 IGSF6O95976 241 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 NR3C1P04150 777 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ERCC1P07992 297 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 NPIPA8P0DM63 369 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PRR23D2P0DMB1 279 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 FGF5P12034 268 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PGCP20142 388 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 GSTM3P21266 225 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 UGT1A5P35504 534 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ID1P41134 155 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 BDKRB1P46663 353 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PLP1P60201 277 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 RAB11AP62491 216 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 NTHL1P78549 312 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 OC90Q02509 493 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PPIL2Q13356 520 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ILKQ13418 452 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ITPK1Q13572 414 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 CRMP1Q14194 572 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 RBBP5Q15291 538 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 RAB11BQ15907 218 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 HAGHQ16775 308 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF829Q3KNS6 432 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 SNAI3Q3KNW1 292 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ACCSLQ4AC99 568 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 SCYL2Q6P3W7 929 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 GCNT7Q6ZNI0 430 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 CYS1Q717R9 158 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 MOB3BQ86TA1 216 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 LINC00523Q86TU6 105 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 DND1Q8IYX4 353 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 FAM9CQ8IZT9 166 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 KIRREL3Q8IZU9 778 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 ASCC1Q8N9N2 400 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 CHDHQ8NE62 594 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 OR13A1Q8NGR1 328 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 OR1L6Q8NGR2 347 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 LKAAEAR1Q8TD35 194 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 HCAR2Q8TDS4 363 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 APOBEC4Q8WW27 367 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 MAIP1Q8WWC4 291 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 DLX4Q92988 240 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 CD101Q93033 1021 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 TMEM143Q96AN5 459 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 OMA1Q96E52 524 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 LMLNQ96KR4 655 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 CAPNS2Q96L46 248 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 C12orf42Q96LP6 360 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 CPXM1Q96SM3 734 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 SLC6A7Q99884 636 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 TRIM62Q9BVG3 475 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 COMMD4Q9H0A8 199 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 NXF5Q9H1B4 397 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 FNDC4Q9H6D8 234 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 AZI2Q9H6S1 392 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 C8orf33Q9H7E9 229 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 C20orf96Q9NUD7 363 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 DCAF13Q9NV06 445 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 IL36GQ9NZH8 169 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 MTCH1Q9NZJ7 389 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PURGQ9UJV8 347 aaKnown RBP3.9□□□□□ -1.79
BRCA1-204ENST00000412061 IKZF2Q9UKS7 526 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 NPIPA1Q9UND3 350 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 PPP2R2CQ9Y2T4 447 aa3.9□□□□□ -1.79
BRCA1-204ENST00000412061 hCG_38984A0A1B0GV85 526 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 A0A1W2PPV4 95 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 LRIT2A6NDA9 550 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 OR5H15A6NDH6 313 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 NKX6-3A6NJ46 265 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 DLGAP1O14490 977 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 RS1O15537 224 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 RANBP6O60518 1105 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 CA1P00915 261 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 CLTAP09496 248 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 CCNB1P14635 433 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 RPL35AP18077 110 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 XRCC1P18887 633 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 HMGB2P26583 209 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 GIFP27352 417 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 CD1CP29017 333 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 OTX1P32242 354 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 GYG1P46976 350 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms