RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ITFG2Q969R8 447 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 HS6ST2Q96MM7 605 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 TSPAN10Q9H1Z9 355 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 LRIT1Q9P2V4 623 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 SCN11AQ9UI33 1791 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 NTHL1P78549 312 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 AMIGO3Q86WK7 504 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 MCATQ8IVS2 390 aaKnown RBP10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 DCUN1D4Q92564 292 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 BMFQ96LC9 184 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 SMCO4Q9NRQ5 59 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 ANKRD10Q9NXR5 420 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 NFAT5O94916 1531 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 TRAPPC2LH3BP13 241 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 GABARAPH6UMI1 98 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 GABARAPO95166 117 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 MGST1P10620 155 aaKnown RBP10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 KITLGP21583 273 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 HRH2P25021 359 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 RPS5P46782 204 aaKnown RBP10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 VEGFBP49765 207 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 GSK3AP49840 483 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 F2RL1P55085 397 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 TAS2R20P59543 309 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 NDUFAF5Q5TEU4 345 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 AGAP7PQ5VUJ5 663 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 GARNL3Q5VVW2 1013 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 AGAP6Q5VW22 663 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 CRELD2Q6UXH1 353 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 MAL2Q969L2 176 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC41A3Q96GZ6 507 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 AGAP4Q96P64 663 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 ACTRT3Q9BYD9 372 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 MAF1Q9H063 256 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 ZP2Q05996 745 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 MAP4K2Q12851 820 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 GPR17Q13304 367 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 Q8N402 240 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 ADAMTS18Q8TE60 1221 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 OR4K3Q96R72 315 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 DMAC2Q9NW81 257 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 MAB21L2Q9Y586 359 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 NUP188Q5SRE5 1749 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 ART1P52961 327 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 CDCA2Q69YH5 1023 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 HSD17B8Q92506 261 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 TSNAXQ99598 290 aaKnown RBP10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 SEC14L4Q9UDX3 406 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 GIMAP2Q9UG22 337 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 DUSP13Q9UII6 198 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 HSPB11Q9Y547 144 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 AIPO00170 330 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 AMY2AP04746 511 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 PRPH2P23942 346 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 NKX3-2P78367 333 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 HNF4GQ14541 408 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 KLHDC10Q6PID8 442 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 UGT2A3Q6UWM9 527 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 TMEM139Q8IV31 216 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 OR52B2Q96RD2 323 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 NELL2Q99435 816 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 HDHD5Q9BXW7 423 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 LGALS13Q9UHV8 139 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 KCPQ6ZWJ8 1503 aa10.62□□□□□ -0.71
PRPF40A-202ENST00000410080 CD300LBA8K4G0 201 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 STC1P52823 247 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SEC61A1P61619 476 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 LCTLQ6UWM7 567 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ZADH2Q8N4Q0 377 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TINAGL1Q9GZM7 467 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TEX51A0A1B0GUA7 166 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 POU2F2P09086 479 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 UCHL1P09936 223 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 BDKRB2P30411 391 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 PYCR1P32322 319 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ALDH3B2P48448 385 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 BMXP51813 675 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 AGFG1P52594 562 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 FBXO46Q6PJ61 603 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SGPP2Q8IWX5 399 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 IQCF1Q8N6M8 205 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 OR4N2Q8NGD1 307 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 MRPL38Q96DV4 380 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 GPR62Q9BZJ7 368 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 PLCXD1Q9NUJ7 323 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 PCDHGA7Q9Y5G6 932 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 LGALS8O00214 317 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 PHYHO14832 338 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 MPIG6BO95866 241 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 RHCEP18577 417 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 EXOSC6Q5RKV6 272 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TMEM236Q5W0B7 351 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 OR52E8Q6IFG1 317 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 PPP1R3BQ86XI6 285 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 MEX3DQ86XN8 651 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 NTPCRQ9BSD7 190 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC7A7Q9UM01 511 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 A0A1W2PP18 115 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC9B1P1A6NJY1 282 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms