RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SPTAN1Q13813 2472 aaKnown RBP9.92□□□□□ -0.82
CHMP3-205ENST00000409810 A0A096LPI6 279 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 IGLV3-32A0A0A0MS00 114 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 TMEM247A6NEH6 219 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ACTL6AO96019 429 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 GSNP06396 782 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 GUSBP08236 651 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 HOXD4P09016 255 aaPredicted RBP9.92□□□□□ -0.82
CHMP3-205ENST00000409810 MSX1P28360 303 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 SMSP52788 366 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 CASP9P55211 416 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 GXYLT1Q4G148 440 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 GPAT3Q53EU6 434 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 EIPR1Q53HC9 387 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 NHSL2Q5HYW2 709 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 WIPI1Q5MNZ9 446 aaPredicted RBP9.92□□□□□ -0.82
CHMP3-205ENST00000409810 HEPHL1Q6MZM0 1159 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF585AQ6P3V2 769 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ENPP6Q6UWR7 440 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ZAR1Q86SH2 424 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 YRDCQ86U90 279 aaKnown RBP9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF614Q8N883 585 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 OR2M3Q8NG83 312 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 OR4C3Q8NH37 302 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ZFP90Q8TF47 636 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 DUSP19Q8WTR2 217 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 GTF2H4Q92759 462 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ABTB1Q969K4 478 aaPredicted RBP9.92□□□□□ -0.82
CHMP3-205ENST00000409810 ROPN1LQ96C74 230 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 CCDC120Q96HB5 630 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 SFXN2Q96NB2 322 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 PHF12Q96QT6 1004 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 NMUR2Q9GZQ4 415 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
CHMP3-205ENST00000409810 DSN1Q9H410 356 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 TPT1P8Q9HAU6 139 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 FBXO34Q9NWN3 711 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 TAS2R10Q9NYW0 307 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 MED11Q9P086 117 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 KLHL14Q9P2G3 628 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 P2RX2Q9UBL9 471 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 LIPT1Q9Y234 373 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 WDR45Q9Y484 360 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 DTNAQ9Y4J8 743 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 KCNE3Q9Y6H6 103 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 COL12A1Q99715 3063 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 DOPEY1Q5JWR5 2465 aa9.92□□□□□ -0.82
CHMP3-205ENST00000409810 PTPN13Q12923 2485 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 A0A087WZY1 265 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 A0A1W2PP18 115 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 LINC01387J3KSC0 135 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 HMGN4O00479 90 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 ANGPT2O15123 496 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 ZNHIT1O43257 154 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 KIAA0513O60268 411 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 HK1P19367 917 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 PPIBP23284 216 aaKnown RBP9.91□□□□□ -0.82
CHMP3-205ENST00000409810 ACVR2AP27037 513 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 CRATP43155 626 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 SUMO3P55854 103 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-205ENST00000409810 CRYZQ08257 329 aaKnown RBP9.91□□□□□ -0.82
CHMP3-205ENST00000409810 FADDQ13158 208 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 GNA13Q14344 377 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 GPR68Q15743 365 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 GLYR1Q49A26 553 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-205ENST00000409810 RAET1LQ5VY80 246 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 VASNQ6EMK4 673 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 SLC2A7Q6PXP3 512 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 APOOLQ6UXV4 268 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 FUNDC1Q8IVP5 155 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF619Q8N2I2 560 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 GATSQ8NAP1 163 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 OR5M9Q8NGP3 310 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 PNPT1Q8TCS8 783 aaKnown RBP9.91□□□□□ -0.82
CHMP3-205ENST00000409810 PHOSPHO1Q8TCT1 267 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 TSPEARQ8WU66 669 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 RAB8BQ92930 207 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 C1GALT1C1Q96EU7 318 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 PIGQQ9BRB3 760 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 UGT2B28Q9BY64 529 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF385DQ9H6B1 395 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 CACYBPQ9HB71 228 aaKnown RBP9.91□□□□□ -0.82
CHMP3-205ENST00000409810 PNPLA3Q9NST1 481 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 ALKBH4Q9NXW9 302 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 CALML5Q9NZT1 146 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 STOML1Q9UBI4 398 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 LEF1Q9UJU2 399 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-205ENST00000409810 CORO2BQ9UQ03 480 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 CAMK2AQ9UQM7 478 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 SLC6A5Q9Y345 797 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 NDUFAF1Q9Y375 327 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 PCDHB14Q9Y5E9 798 aa9.91□□□□□ -0.82
CHMP3-205ENST00000409810 NPIPA5A0A0B4J1W7 369 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 WIPF3A6NGB9 483 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 AHRRA9YTQ3 701 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 NPIPA7E9PJI5 369 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 NPIPB9F8W1W9 429 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 GTPBP1O00178 669 aaKnown RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 ADAM10O14672 748 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 HCRTR2O43614 444 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms