RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 DCTN2Q13561 401 aaKnown RBP19.18■□□□□ 0.66
USP39-203ENST00000409470 CLEC12AQ5QGZ9 265 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 WDR36Q8NI36 951 aaKnown RBP19.18■□□□□ 0.66
USP39-203ENST00000409470 PTCHD1Q96NR3 888 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 PELOQ9BRX2 385 aaKnown RBP19.18■□□□□ 0.66
USP39-203ENST00000409470 TSSK6Q9BXA6 273 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 OR10A5Q9H207 317 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 TESQ9UGI8 421 aaKnown RBP19.18■□□□□ 0.66
USP39-203ENST00000409470 IGKV1D-16P01601 117 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 RGS19P49795 217 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 ZNF91Q05481 1191 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 SHBQ15464 509 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 NNATQ16517 81 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 MEDAGQ5VYS4 303 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 NPSR1Q6W5P4 371 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 ZBTB46Q86UZ6 589 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 GPR135Q8IZ08 494 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 OR8D4Q8NGM9 314 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 OR1L3Q8NH93 324 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 C16orf52Q8NHV5 167 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 OSTF1Q92882 214 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 LRR1Q96L50 414 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 SLC38A2Q96QD8 506 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 TBC1D23Q9NUY8 699 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 DHCR7Q9UBM7 475 aaKnown RBP19.17■□□□□ 0.66
USP39-203ENST00000409470 GMEB2Q9UKD1 530 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 OR10H1Q9Y4A9 318 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 H3BMH7 237 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 M0R3G1 203 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 FMO6PO60774 539 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 HSMCR30P0CW71 290 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 DBTP11182 482 aaKnown RBP19.17■□□□□ 0.66
USP39-203ENST00000409470 BNC1Q01954 994 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 FUT7Q11130 342 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 BIKQ13323 160 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 AP1ARQ63HQ0 302 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 ZNF367Q7RTV3 350 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 D2HGDHQ8N465 521 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 RCBTB1Q8NDN9 531 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 NDNFQ8TB73 568 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.17■□□□□ 0.66
USP39-203ENST00000409470 CNOT9Q92600 299 aaKnown RBP19.17■□□□□ 0.66
USP39-203ENST00000409470 PRSS27Q9BQR3 290 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 PRRG3Q9BZD7 231 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 C14orf105Q9NVL8 296 aa19.17■□□□□ 0.66
USP39-203ENST00000409470 CACNA1IQ9P0X4 2223 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 C17orf105B2RV13 164 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 GUSBP08236 651 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 ADRA2AP08913 450 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 DRD5P21918 477 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 LAMA1P25391 3075 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 ENTPD1P49961 510 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 MED22Q15528 200 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 SYT14P1Q58G82 188 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 PRAMEF17Q5VTA0 474 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 RPL3LQ92901 407 aaKnown RBP19.16■□□□□ 0.66
USP39-203ENST00000409470 MVB12AQ96EY5 273 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 TMEM80Q96HE8 168 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 ZNF559Q9BR84 538 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 NDC1Q9BTX1 674 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 G6PC3Q9BUM1 346 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 TEX12Q9BXU0 123 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 TMEM27Q9HBJ8 222 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 LANCL2Q9NS86 450 aa19.16■□□□□ 0.66
USP39-203ENST00000409470 MN1Q10571 1320 aaPredicted RBP19.16■□□□□ 0.66
USP39-203ENST00000409470 CABIN1Q9Y6J0 2220 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 KLF4O43474 513 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 CLPXO76031 633 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 FOLR1P15328 257 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 GALNSP34059 522 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 NCS1P62166 190 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 MINDY4Q4G0A6 757 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 ARMCX4Q5H9R4 360 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 SLC25A30Q5SVS4 291 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 TMEM239Q8WW34 195 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 CCDC74AQ96AQ1 378 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 EVA1AQ9H8M9 152 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 PNO1Q9NRX1 252 aaKnown RBP19.15■□□□□ 0.66
USP39-203ENST00000409470 ASXL3Q9C0F0 2248 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 UNC13CQ8NB66 2214 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 HYAL3O43820 417 aaPredicted RBP19.15■□□□□ 0.66
USP39-203ENST00000409470 CT45A8P0DMV1 189 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 CT45A9P0DMV2 189 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 NCF4Q15080 339 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 CT45A2Q5DJT8 189 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 WDR88Q6ZMY6 472 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 GATAD2AQ86YP4 633 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 CACTIN-AS1Q8N1I8 211 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 ZNF615Q8N8J6 731 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 POGLUT1Q8NBL1 392 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 TMEM163Q8TC26 289 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 LGALS12Q96DT0 336 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 ARSGQ96EG1 525 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 SLC41A2Q96JW4 573 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 ZNF582Q96NG8 517 aaPredicted RBP19.15■□□□□ 0.66
USP39-203ENST00000409470 SH3GL3Q99963 347 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.15■□□□□ 0.66
USP39-203ENST00000409470 PRODH2Q9UF12 536 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 SERTAD3Q9UJW9 196 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 CBLCQ9ULV8 474 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms