RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SPATA2Q9UM82 520 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 DNMT3AQ9Y6K1 912 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 DMXL1Q9Y485 3027 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 GVINP1Q7Z2Y8 2422 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SPTBN4Q9H254 2564 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 KCNE1BA0A087WTH5 132 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF729A6NN14 1252 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 GABRPO00591 440 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 CCL22O00626 93 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF749O43361 778 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 SGCEO43556 437 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 PAGE1O75459 146 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 FCER2P06734 321 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 TYRP1P17643 537 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 AMD1P17707 334 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 RAB3BP20337 219 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 PVALBP20472 110 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 DDX6P26196 483 aaKnown RBP eCLIP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 GIFP27352 417 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 PLA2G5P39877 138 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 VIPR2P41587 438 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 SELENOPP49908 381 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 GDI2P50395 445 aaKnown RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 MAZP56270 477 aaKnown RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 MC2RQ01718 297 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 EEF1A2Q05639 463 aaKnown RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 DNAH14Q0VDD8 3507 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 TCF15Q12870 199 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 KLF9Q13886 244 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 TRAM1Q15629 374 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 UGT8Q16880 541 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF630Q2M218 657 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 CDNFQ49AH0 187 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 MINDY4Q4G0A6 757 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 AVPI1Q5T686 147 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 LYPD4Q6UWN0 246 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 GSG1LQ6UXU4 331 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 MOB3CQ70IA8 216 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ANKRD46Q86W74 232 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 METTL23Q86XA0 190 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 L3MBTL4Q8NA19 623 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 SIDT2Q8NBJ9 832 aaKnown RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 HUS1BQ8NHY5 278 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 COQ8AQ8NI60 647 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 PSMG2Q969U7 264 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 RSPRY1Q96DX4 576 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 PHYHIPLQ96FC7 376 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 SMOQ99835 787 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 FAIM2Q9BWQ8 316 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 POLR1EQ9GZS1 481 aaKnown RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 SPRTNQ9H040 489 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ANKRD19PQ9H560 264 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 SEMA3GQ9NS98 782 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 TMEM248Q9NWD8 314 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 RASL12Q9NYN1 266 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 GDE1Q9NZC3 331 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 DNAJC27Q9NZQ0 273 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 KLHL42Q9P2K6 505 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 MGAT4CQ9UBM8 478 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 KIF26AQ9ULI4 1882 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 CARHSP1Q9Y2V2 147 aaKnown RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ARL5AQ9Y689 179 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ZFP37Q9Y6Q3 630 aaPredicted RBP9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 ANAPC1Q9H1A4 1944 aa9.96□□□□□ -0.81
NIF3L1-204ENST00000409357 A0A1W2PRB8 838 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 TCRBV16S1A1N1A0A5B0 115 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 MYBPHLA2RUH7 354 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 PRAMEF25A6NGN4 478 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 DBX1A6NMT0 343 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 GABRR3A8MPY1 467 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 M0R129 80 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 UBE2CO00762 179 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 PRODHO43272 600 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 PRAMEF2O60811 474 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ALDOBP05062 364 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 SERPIND1P05546 499 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 UBBP0CG47 229 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 UBCP0CG48 685 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ATP5A1P25705 553 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 GKP32189 559 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 THBS2P35442 1172 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 CAPZA2P47755 286 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 XKP51811 444 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 EPHB3P54753 998 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 PCBP3P57721 371 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 KIAA1024LP59773 190 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 RPS27AP62979 156 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 UBA52P62987 128 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 LGALS3BPQ08380 585 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC10A7Q0GE19 358 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ECH1Q13011 328 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 MPPED2Q15777 294 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 SYT14P1Q58G82 188 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF660Q6AZW8 331 aaPredicted RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 NOXRED1Q6NXP6 359 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ASB18Q6ZVZ8 466 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 USP53Q70EK8 1073 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms