RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 STX4Q12846 297 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 SF3A3Q12874 501 aaKnown RBP eCLIP8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 PCBP2Q15366 365 aaKnown RBP eCLIP8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 ELAVL1Q15717 326 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM35AQ53FP2 167 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 UBE2UQ5VVX9 321 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 OR4C11Q6IEV9 310 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 ANKRD26P1Q6NSI1 321 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 C3P1Q6ZMU1 363 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 SULF2Q8IWU5 870 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 MICU2Q8IYU8 434 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 DEPDC4Q8N2C3 294 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM151AQ8N4L1 468 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM178AQ8NBL3 297 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 WDR20Q8TBZ3 569 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 SLC2A12Q8TD20 617 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 ITLN2Q8WWU7 325 aaPredicted RBP8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 ATP6V1E2Q96A05 226 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 MTFMTQ96DP5 389 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 CMTM7Q96FZ5 175 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 CMTM3Q96MX0 182 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 OR8D2Q9GZM6 311 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 HMG20AQ9NP66 347 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 DEPPQ9NTK1 212 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 VTI1BQ9UEU0 232 aa8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 MRPS33Q9Y291 106 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-202ENST00000409020 MYO7BQ6PIF6 2116 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 TRIM49D1C9J1S8 452 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 CLDN25C9JDP6 229 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 H0YIV9 168 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 CCL21O00585 134 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 CPN2P22792 545 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 DCKP27707 260 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 BSGP35613 385 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 MEOX1P50221 254 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 ADORA2A-AS1P86434 159 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 TGM3Q08188 693 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 LTB4RQ15722 352 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 AP5B1Q2VPB7 878 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 KRBOX4Q5JUW0 171 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 LIPJQ5W064 366 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 CFAP161Q6P656 301 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 THSD4Q6ZMP0 1018 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 PLEKHG7Q6ZR37 379 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 CHSY3Q70JA7 882 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 KRT74Q7RTS7 529 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 CYP4Z2PQ8N1L4 340 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 OR52N1Q8NH53 320 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 ADAMTS18Q8TE60 1221 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 FIG4Q92562 907 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 UBE2E3Q969T4 207 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 PHF21AQ96BD5 680 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 EPB41L4BQ9H329 900 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 PCTPQ9UKL6 214 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 ERVK-19Q9WJR5 959 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 ENTPD4Q9Y227 616 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 MAGED1Q9Y5V3 778 aaPredicted RBP8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 CLCA3PQ9Y6N3 262 aa8.93□□□□□ -0.98
NIF3L1-202ENST00000409020 ZFHX3Q15911 3703 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 A0A0A6YYD5 115 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 A0A1B0GUH1 482 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 A0A1W2PR48 441 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 A0A1W2PRG6 482 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ISPDA4D126 451 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 FOXO6A8MYZ6 492 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 FCHO1O14526 889 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 HS6ST1O60243 411 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ZFAND5O76080 213 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 SEMA3DO95025 777 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 NADKO95544 446 aaPredicted RBP8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 PRF1P14222 555 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 UGT2B10P36537 528 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 SOX3P41225 446 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 PIK3CBP42338 1070 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 SSR4P51571 173 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 TSPAN5P62079 268 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 RNF4P78317 190 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 PLIN5Q00G26 463 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 FLI1Q01543 452 aaPredicted RBP8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 TNFRSF17Q02223 184 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 TRAF3Q13114 568 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ZNF750Q32MQ0 723 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 HES5Q5TA89 166 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 KANK2Q63ZY3 851 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 LETMD1Q6P1Q0 360 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 IL20RBQ6UXL0 311 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 HSDL2Q6YN16 418 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ARMC8Q8IUR7 673 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 C9orf40Q8IXQ3 194 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM132CQ8N3T6 1108 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM156Q8N614 296 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 HORMAD2Q8N7B1 307 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 L3MBTL4Q8NA19 623 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ZNF721Q8TF20 911 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 HDAC2Q92769 488 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 YIPF5Q969M3 257 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 RGMAQ96B86 450 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 KCTD12Q96CX2 325 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 RASL10BQ96S79 203 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms