RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CDKN3Q16667 212 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 COX20Q5RI15 118 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 LIPKQ5VXJ0 399 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 C18orf63Q68DL7 685 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GPR139Q6DWJ6 353 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 LRRN1Q6UXK5 716 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TMEM184AQ6ZMB5 413 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SYT13Q7L8C5 426 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 B3GNT8Q7Z7M8 397 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CALHM3Q86XJ0 350 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 RIMKLAQ8IXN7 391 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ARL14Q8N4G2 192 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SPEM1Q8N4L4 309 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 DNAJC22Q8N4W6 341 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 PNLDC1Q8NA58 520 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 OR52E2Q8NGJ4 325 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 OR6N2Q8NGY6 317 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 OR51Q1Q8NH59 317 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CEP76Q8TAP6 659 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SMPDL3BQ92485 455 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 EDAQ92838 391 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 HPS1Q92902 700 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 BPIFA2Q96DR5 249 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CCDC32Q9BV29 185 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MED28Q9H204 178 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 C6orf106Q9H6K1 298 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GPN2Q9H9Y4 310 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SMURF1Q9HCE7 757 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TIGARQ9NQ88 270 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SIRT5Q9NXA8 310 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 FTSJ1Q9UET6 329 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 EBF1Q9UH73 591 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF225Q9UK10 706 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 NXT1Q9UKK6 140 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MAGED1Q9Y5V3 778 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GPC6Q9Y625 555 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 BRCA1P38398 1863 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TMEM265A0A087WTH1 108 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PRAMEF33A0A0G2JMD5 474 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A1B0GTL3 188 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A1B0GVI7 797 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 METTL21EPA6NDL7 271 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ARRDC5A6NEK1 342 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 EFCAB7A8K855 629 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 H3BMQ9 156 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 J3QRK9 145 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 DPM1O60762 260 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PRAMEF10O60809 474 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 TNFRSF21O75509 655 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ZFAND5O76080 213 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PAPLNO95428 1278 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 CYB5AP00167 134 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 S1PR1P21453 382 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ITGB8P26012 769 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PXNP49023 591 aaPredicted RBP4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 MLLT10P55197 1068 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 LIM2P55344 173 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 OR12D2P58182 307 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 CTXN1P60606 82 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PPP2CBP62714 309 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PPP2CAP67775 309 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PPP2R2BQ00005 443 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 CSTF1Q05048 431 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 RIPPLY1Q0D2K3 151 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 HNRNPA0Q13151 305 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 APOFQ13790 326 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 CBFBQ13951 182 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ANKDD1AQ495B1 522 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ZFP69Q49AA0 526 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 HSD17B12Q53GQ0 312 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 SLX4IPQ5VYV7 408 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 GLT8D1Q68CQ7 371 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PLBD1Q6P4A8 553 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF613Q6PF04 617 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 MBOAT2Q6ZWT7 520 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 SHFQ7M4L6 423 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 HMGN2P46Q86SG4 172 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 LHFPL3Q86UP9 236 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 VRK2Q86Y07 508 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 CPOQ8IVL8 374 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 LRRC56Q8IYG6 542 aaPredicted RBP4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 HMGCLL1Q8TB92 370 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 MUL1Q969V5 352 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 DDIT4LQ96D03 193 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 MVB12AQ96EY5 273 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 C16orf58Q96GQ5 468 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF764Q96H86 408 aaPredicted RBP4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 COG8Q96MW5 612 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 TM9SF2Q99805 663 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 MRI1Q9BV20 369 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF717Q9BY31 904 aaPredicted RBP4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 MROQ9BYG7 248 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC6A17Q9H1V8 727 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 ZBTB20Q9HC78 741 aaPredicted RBP4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 PRDM9Q9NQV7 894 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A087WV62 115 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A1W2PR48 441 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 LILRA5A6NI73 299 aa4.43□□□□□ -1.7
PCDH11X-207ENST00000406881 TRIM64CA6NLI5 447 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 765.3 ms