RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 LCN1P31025 176 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 CAPGP40121 348 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 RFX3P48380 749 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 NCF4Q15080 339 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 EBPQ15125 230 aaKnown RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 MICAQ29983 383 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 TMEM164Q5U3C3 297 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 LCN10Q6JVE6 187 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 C19orf48Q6RUI8 117 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 TMEM205Q6UW68 189 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 CPEB2Q7Z5Q1 589 aaKnown RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 COMTD1Q86VU5 262 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 LACC1Q8IV20 430 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 ZNF321PQ8N8H1 164 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 ATG16L2Q8NAA4 619 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 B3GNT7Q8NFL0 401 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 OR4N2Q8NGD1 307 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 LPAR4Q99677 370 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 PSD2Q9BQI7 771 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 ANKRD60Q9BZ19 345 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 B3GNT4Q9C0J1 378 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 POLR2J2Q9GZM3 115 aaKnown RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 HOXD1Q9GZZ0 328 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 POLR2J3Q9H1A7 115 aaKnown RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 NMNAT1Q9HAN9 279 aaPredicted RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 FBXO34Q9NWN3 711 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 PPIEQ9UNP9 301 aaKnown RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 PCDHGA3Q9Y5H0 932 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 STK17BO94768 372 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 SNAP29O95721 258 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 CCNYL3P0C7X3 344 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 ANXA8P13928 327 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 PRKACGP22612 351 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 LIMS1P48059 325 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 GANABQ14697 944 aaKnown RBP19.39■□□□□ 0.69
TPM1-208ENST00000404484 ZNF141Q15928 474 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 NNATQ16517 81 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 EXOC3L2Q2M3D2 409 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 FAHD1Q6P587 224 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 LRRC69Q6ZNQ3 347 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 RANBP3LQ86VV4 465 aaPredicted RBP19.39■□□□□ 0.69
TPM1-208ENST00000404484 RBM45Q8IUH3 476 aaKnown RBP19.39■□□□□ 0.69
TPM1-208ENST00000404484 SPACA3Q8IXA5 215 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 CMIPQ8IY22 773 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 GALNT6Q8NCL4 622 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 OR10G2Q8NGC3 310 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 KCNE4Q8WWG9 221 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 CYGBQ8WWM9 190 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 ADIPOR1Q96A54 375 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 ALPK1Q96QP1 1244 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 GAL3ST4Q96RP7 486 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 FNDC11Q9BVV2 318 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.39■□□□□ 0.69
TPM1-208ENST00000404484 A4GNTQ9UNA3 340 aa19.39■□□□□ 0.69
TPM1-208ENST00000404484 PEX12O00623 359 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 TO15178 435 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 CCNB2O95067 398 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 OXSR1O95747 527 aaPredicted RBP19.38■□□□□ 0.69
TPM1-208ENST00000404484 IGKV1D-16P01601 117 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 ATP12AP54707 1039 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 PDK3Q15120 406 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 MAPK14Q16539 360 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 SLC36A3Q495N2 470 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 TTC23Q5W5X9 447 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 KDM4DQ6B0I6 523 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 PAPD4Q6PIY7 484 aaKnown RBP19.38■□□□□ 0.69
TPM1-208ENST00000404484 CHERPQ8IWX8 916 aaKnown RBP19.38■□□□□ 0.69
TPM1-208ENST00000404484 C9orf40Q8IXQ3 194 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 OFCC1Q8IZS5 231 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 CLIP4Q8N3C7 705 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 LINC00471Q8N535 108 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 OR52J3Q8NH60 311 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 SLC35B4Q969S0 331 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 HSPBAP1Q96EW2 488 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 VMP1Q96GC9 406 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 CNBD2Q96M20 576 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 SEMA4CQ9C0C4 833 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 WWTR1Q9GZV5 400 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 NXF5Q9H1B4 397 aaKnown RBP19.38■□□□□ 0.69
TPM1-208ENST00000404484 CHST2Q9Y4C5 530 aa19.38■□□□□ 0.69
TPM1-208ENST00000404484 A0A1W2PRQ8 180 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 CDHR4A6H8M9 788 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 NPIPB9F8W1W9 429 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 FAAHO00519 579 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 FFAR1O14842 300 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 IL33O95760 270 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 IGHEP01854 428 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 KRT20P35900 424 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 GPR143P51810 404 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 TAS2R41P59536 307 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 DGCR6Q14129 220 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 TGIF1Q15583 401 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 FGD3Q5JSP0 725 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 DCST1Q5T197 706 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 MRPL2Q5T653 305 aaKnown RBP19.37■□□□□ 0.69
TPM1-208ENST00000404484 C6orf15Q6UXA7 325 aaPredicted RBP19.37■□□□□ 0.69
TPM1-208ENST00000404484 ZAR1Q86SH2 424 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 ZNF527Q8NB42 609 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 ZNF555Q8NEP9 628 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 BARD1Q99728 777 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms