RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 C11orf65Q8NCR3 313 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 OIT3Q8WWZ8 545 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 PMM1Q92871 262 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 ZG16BQ96DA0 208 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 ZNF583Q96ND8 569 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 TTTY12Q9BZ98 90 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 PIF1Q9H611 641 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 MTHFD2LQ9H903 347 aaPredicted RBP26.81■■□□□ 1.88
USP42-202ENST00000404008 BCL2L10Q9HD36 194 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 ZFP64Q9NPA5 681 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 NTNG1Q9Y2I2 539 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 AP3M1Q9Y2T2 418 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 L3MBTL1Q9Y468 752 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 COL6A6A6NMZ7 2263 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 A0A0G2JPF8 293 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 HNRNPCL2B2RXH8 293 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 HNRNPCL3B7ZW38 293 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 C5orf58C9J3I9 102 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 NME4O00746 187 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 HNRNPCL1O60812 293 aaKnown RBP26.8■■□□□ 1.88
USP42-202ENST00000404008 GLSO94925 669 aaPredicted RBP26.8■■□□□ 1.88
USP42-202ENST00000404008 ANGPTL1O95841 491 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 HNRNPCL4P0DMR1 293 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 MASP1P48740 699 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 SCARB2Q14108 478 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 MAPK14Q16539 360 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 PDZK1Q5T2W1 519 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 REEP3Q6NUK4 255 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 CISD2Q8N5K1 135 aaKnown RBP26.8■■□□□ 1.88
USP42-202ENST00000404008 JSRP1Q96MG2 331 aaPredicted RBP26.8■■□□□ 1.88
USP42-202ENST00000404008 QRSL1Q9H0R6 528 aaKnown RBP26.8■■□□□ 1.88
USP42-202ENST00000404008 SDHAF3Q9NRP4 125 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 ABCD2Q9UBJ2 740 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 DTNAQ9Y4J8 743 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 HRH3Q9Y5N1 445 aa26.8■■□□□ 1.88
USP42-202ENST00000404008 C17orf51A8MQB3 221 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 SNPHO15079 494 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 NDUFB5O43674 189 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 MXRA7P84157 204 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 SLC25A3Q00325 362 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 HYAL4Q2M3T9 481 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 PRR30Q53SZ7 412 aaPredicted RBP26.79■■□□□ 1.88
USP42-202ENST00000404008 RNFT1Q5M7Z0 435 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 TIGD3Q6B0B8 471 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 FAM180AQ6UWF9 173 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 PGAM4Q8N0Y7 254 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 WDSUB1Q8N9V3 476 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 BBS10Q8TAM1 723 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 SNRNP40Q96DI7 357 aaKnown RBP26.79■■□□□ 1.88
USP42-202ENST00000404008 REXO5Q96IC2 774 aaKnown RBP26.79■■□□□ 1.88
USP42-202ENST00000404008 SPAG4Q9NPE6 437 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 NDE1Q9NXR1 346 aa26.79■■□□□ 1.88
USP42-202ENST00000404008 SUCOQ9UBS9 1254 aaKnown RBP26.79■■□□□ 1.88
USP42-202ENST00000404008 AGAP5A6NIR3 686 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 TTLL8A6PVC2 850 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 B2RBV5 119 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 GNB5O14775 395 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 C1QL1O75973 258 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 PGM3O95394 542 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 RPS4Y1P22090 263 aaKnown RBP26.78■■□□□ 1.88
USP42-202ENST00000404008 ELAVL4P26378 380 aaKnown RBP26.78■■□□□ 1.88
USP42-202ENST00000404008 CPOXP36551 454 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 PLGLB1Q02325 96 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 CD226Q15762 336 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 ZNF843Q8N446 348 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 ZNF614Q8N883 585 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 GATSQ8NAP1 163 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 HIPK4Q8NE63 616 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 OR1J4Q8NGS1 313 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 PPP4R1LQ9P1A2 415 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 TMEM181Q9P2C4 612 aa26.78■■□□□ 1.88
USP42-202ENST00000404008 B4DXG7 233 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 SUV39H1O43463 412 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 CRYABP02511 175 aaKnown RBP26.77■■□□□ 1.88
USP42-202ENST00000404008 ZNF24P17028 368 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 RNF144AP50876 292 aaPredicted RBP26.77■■□□□ 1.88
USP42-202ENST00000404008 C17orf67Q0P5P2 114 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 VMACQ2NL98 169 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 C16orf89Q6UX73 402 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 HMGN2P46Q86SG4 172 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 MISPQ8IVT2 679 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 DUSP19Q8WTR2 217 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 GNRHR2Q96P88 292 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 USP22Q9UPT9 525 aa26.77■■□□□ 1.88
USP42-202ENST00000404008 SERINC4A6NH21 518 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 FAM220BPB1ANY3 271 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 RFPL3SP0C7P2 107 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 PCGF2P35227 344 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 LIPEQ05469 1076 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 OR5M10Q6IEU7 315 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 C6orf89Q6UWU4 347 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 SLC22A16Q86VW1 577 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 PLCZ1Q86YW0 608 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 SLC30A8Q8IWU4 369 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 RBM15BQ8NDT2 890 aaKnown RBP26.76■■□□□ 1.87
USP42-202ENST00000404008 ZNF703Q9H7S9 590 aaPredicted RBP26.76■■□□□ 1.87
USP42-202ENST00000404008 ANGPT4Q9Y264 503 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 C15orf41Q9Y2V0 281 aa26.76■■□□□ 1.87
USP42-202ENST00000404008 IGLV3-32A0A0A0MS00 114 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 FAM166BA8MTA8 275 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms