RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 ALPK3Q96L96 1907 aa10.35□□□□□ -0.75
SCFD2-202ENST00000401642 SGK494L7N484 410 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 CDK2AP1O14519 115 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PTTG1O95997 202 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 EGFP01133 1207 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 CELA2BP08218 269 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 LIMS3P0CW19 117 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 LIMS4P0CW20 117 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 CPMP14384 443 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PAICSP22234 425 aaKnown RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 VSX2P58304 361 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 MLLT11Q13015 90 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 TBRG1Q3YBR2 411 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 TMEM35AQ53FP2 167 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 ZNF57Q68EA5 555 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 ANKRD54Q6NXT1 300 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 LRRC25Q8N386 305 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 COX18Q8N8Q8 333 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 TMEM52Q8NDY8 209 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 OR4K14Q8NGD5 310 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 FYTTD1Q96QD9 318 aaKnown RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PSD2Q9BQI7 771 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 KATNB1Q9BVA0 655 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 IFT27Q9BW83 186 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 HINT3Q9NQE9 182 aaKnown RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 NDUFB11Q9NX14 153 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 NLGN3Q9NZ94 848 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 AP1M2Q9Y6Q5 423 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 LRRN3E7EW58 273 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 K7EQS6 105 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PSMD9O00233 223 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PRODHO43272 600 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 HCRTR1O43613 425 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 ADH1BP00325 375 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 GABRA3P34903 492 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PSPHP78330 225 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 DLX2Q07687 328 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 MEDAGQ5VYS4 303 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 FBXO42Q6P3S6 717 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 FBXO46Q6PJ61 603 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 FAM26EQ8N5C1 309 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 IL17RDQ8NFM7 739 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 TTLQ8NG68 377 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 OR13C2Q8NGS9 318 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 NEIL3Q8TAT5 605 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 GNPDA2Q8TDQ7 276 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 CTRCQ99895 268 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PINK1Q9BXM7 581 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 ACTRT3Q9BYD9 372 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 C11orf54Q9H0W9 315 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 MIXL1Q9H2W2 232 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 LRRN3Q9H3W5 708 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 SATB2Q9UPW6 733 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 V9GYH0 126 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 FRYLO94915 3013 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 GXYLT2A0PJZ3 443 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 C12orf71A8MTZ7 269 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 IDH3BO43837 385 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 CRYZL1O95825 349 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 LAMP2P13473 410 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 IFNGR2P38484 337 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 FRKP42685 505 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 SLC1A3P43003 542 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 CTBP2P56545 445 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 CDK5Q00535 292 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 GPR18Q14330 331 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 NDUFAF6Q330K2 333 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 KLHL22Q53GT1 634 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 DDI2Q5TDH0 399 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 TUBA3EQ6PEY2 450 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 ZAR1Q86SH2 424 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 RAB43Q86YS6 212 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 GATSQ8NAP1 163 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 WACQ9BTA9 647 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 PLSCR3Q9NRY6 295 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 TNFRSF10DQ9UBN6 386 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 ZNF221Q9UK13 617 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 SNX7Q9UNH6 387 aa10.34□□□□□ -0.75
SCFD2-202ENST00000401642 DIMT1Q9UNQ2 313 aaKnown RBP10.34□□□□□ -0.75
SCFD2-202ENST00000401642 SHISA3A0PJX4 238 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 CCDC182A6NF36 153 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 FAM171A2A8MVW0 826 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 DYRK3O43781 588 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 ACP2P11117 423 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 RFX2P48378 723 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 COX10Q12887 443 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 SHHQ15465 462 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 NDUFA5Q16718 116 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 MRPL2Q5T653 305 aaKnown RBP10.33□□□□□ -0.76
SCFD2-202ENST00000401642 MFSD12Q6NUT3 480 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 CNIH2Q6PI25 160 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 ZNF836Q6ZNA1 936 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 ARL14Q8N4G2 192 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 SIRT6Q8N6T7 355 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 LILRB4Q8NHJ6 448 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 ENKURQ8TC29 256 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 DACT3Q96B18 629 aaPredicted RBP10.33□□□□□ -0.76
SCFD2-202ENST00000401642 CCDC3Q9BQI4 270 aa10.33□□□□□ -0.76
SCFD2-202ENST00000401642 C1QTNF2Q9BXJ5 285 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms