RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SNRPNP63162 240 aaKnown RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 RAB40BQ12829 278 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 FLYWCH1Q4VC44 716 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 VASH1Q7L8A9 365 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF438Q7Z4V0 828 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ABCG5Q9H222 651 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 OR52D1Q9H346 318 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 GTF2A1LQ9UNN4 478 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 LSM2Q9Y333 95 aaKnown RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 PCDHGB2Q9Y5G2 931 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ALG5Q9Y673 324 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 LOC105369274A0A096LPK9 316 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 EML2O95834 649 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 EPPINO95925 133 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 YES1P07947 543 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 DRD5P21918 477 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 DRD3P35462 400 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 HSD17B2P37059 387 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 CENPAP49450 140 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 FUT5Q11128 374 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF155Q12901 538 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 RPA4Q13156 261 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 C1orf61Q13536 156 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 E2F2Q14209 437 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 OCLNQ16625 522 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 DUSP5Q16690 384 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 KIAA1211LQ6NV74 962 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 GDPGP1Q6ZNW5 385 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 NOXA1Q86UR1 476 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 SFTPA2Q8IWL1 248 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 OR4N4Q8N0Y3 316 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ACBD7Q8N6N7 88 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 OR4K14Q8NGD5 310 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 OR8H1Q8NGG4 311 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ZMYND19Q96E35 227 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ST6GAL2Q96JF0 529 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF559Q9BR84 538 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 ALG8Q9BVK2 526 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 GPR174Q9BXC1 333 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 AICDAQ9GZX7 198 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 NXF2Q9GZY0 626 aaKnown RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 TBC1D29Q9UFV1 150 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 EXOSC1Q9Y3B2 195 aaKnown RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 A0A1B0GVT2 93 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 OR6C74A6NCV1 312 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 PIPP12273 146 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 PGDP52209 483 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 SHC2P98077 582 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 DPTQ07507 201 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 TSPAN31Q12999 210 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 GPR50Q13585 617 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 FAM109BQ6ICB4 259 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 SDE2Q6IQ49 451 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 C1orf94Q6P1W5 598 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 NRROSQ86YC3 692 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 RASGRP3Q8IV61 690 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 OR4K13Q8NH42 304 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 CHAC2Q8WUX2 184 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 SLC7A6Q92536 515 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 PINK1Q9BXM7 581 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 BTBD1Q9H0C5 482 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 PRDM7Q9NQW5 492 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 MAFFQ9ULX9 164 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 RASD1Q9Y272 281 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 SLC27A6Q9Y2P4 619 aa11.83□□□□□ -0.52
PPP4R1-202ENST00000400555 A0A0A6YYD5 115 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 PROM1O43490 865 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 RNGTTO60942 597 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 PPP1R3DO95685 299 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 HTR2BP41595 481 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 FGL2Q14314 439 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 RPE65Q16518 533 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 TP53I3Q53FA7 332 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 PRSS41Q7RTY9 318 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 C7orf61Q8IZ16 206 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 MORN4Q8NDC4 146 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 OR6C4Q8NGE1 309 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 OR4C6Q8NH72 309 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 HMGB4Q8WW32 186 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF707Q96C28 371 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 ACTRT3Q9BYD9 372 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 CCDC86Q9H6F5 360 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 SYNPO2LQ9H987 977 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 FAM86C2PA6NEL3 165 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 LRRN3E7EW58 273 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 PRR23D1E9PI22 279 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 HOXC11O43248 304 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 RPP14O95059 124 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 SYPP08247 313 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 PRR23D2P0DMB1 279 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 CPEP16870 476 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 ERV3-1Q14264 604 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 ARHGAP19Q14CB8 494 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 PGGHGQ32M88 737 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 OTPQ5XKR4 325 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 LRRC25Q8N386 305 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 SIRT6Q8N6T7 355 aa11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 SRFBP1Q8NEF9 429 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-202ENST00000400555 ACOT11Q8WXI4 607 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms