RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 B3GNT7Q8NFL0 401 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 ZNF461Q8TAF7 563 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 PLCXD1Q9NUJ7 323 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 GPATCH2Q9NW75 528 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 PCDHGA7Q9Y5G6 932 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 C10orf71Q711Q0 1435 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 A0A1W2PS29 197 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 BCAS1O75363 584 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 RAB3DO95716 219 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 MT-ND4P03905 459 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 RAB6AP20340 208 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 PRPS1P60891 318 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 RPS27AP62979 156 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 UBA52P62987 128 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 IL13RA1P78552 427 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 EIF2B1Q14232 305 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 GALEQ14376 348 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 NSDHLQ15738 373 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 TATDN3Q17R31 274 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 C2orf76Q3KRA6 126 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 DNAJC22Q8N4W6 341 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 C12orf45Q8N5I9 185 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 SCAMP4Q969E2 229 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 BMFQ96LC9 184 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 RDH14Q9HBH5 336 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 ZNFX1Q9P2E3 1918 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 OR7A17O14581 309 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 HTR3BO95264 441 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 NIPAL3Q6P499 406 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 OR5L2Q8NGL0 311 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 TMEM19Q96HH6 336 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 MRI1Q9BV20 369 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 KIAA2026Q5HYC2 2103 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 SPTAN1Q13813 2472 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 MTMR11A4FU01 709 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 VEGFDO43915 354 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 NFATC4Q14934 902 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 EIF4HQ15056 248 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 PGM2L1Q6PCE3 622 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 CREB3L4Q8TEY5 395 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 A0A0U1RQF3 1178 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 FAM72CH0Y354 149 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 UPP1Q16831 310 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 FAM72AQ5TYM5 149 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 FAM72DQ6L9T8 149 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 FAM72BQ86X60 149 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 NPRL2Q8WTW4 380 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 C3orf49Q96BT1 292 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 INTS6Q9UL03 887 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 CAMTA1Q9Y6Y1 1673 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 D6RAR5 112 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 ARSBP15848 533 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 HOXA9P31269 272 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 ADARB1P78563 741 aaKnown RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 ELOCQ15369 112 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 ZNF679Q8IYX0 411 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 MARCH4Q9P2E8 410 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-202ENST00000400186 LOC285095A0A1B0GVY8 99 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 COCHO43405 550 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 RHOP08100 348 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 DOCK5Q9H7D0 1870 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 STMND1H3BQB6 276 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 FOXK1P85037 733 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 SHC2P98077 582 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 ZXDBP98169 803 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 RELAQ04206 551 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 TDGQ13569 410 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 GPR19Q15760 415 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 GPR155Q7Z3F1 870 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 SLC7A13Q8TCU3 470 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 SNED1Q8TER0 1413 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 C5P01031 1676 aa9.09□□□□□ -0.95
CSMD1-202ENST00000400186 TSPAN11A1L157 253 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 MEIOCA2RUB1 952 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 GPR17Q13304 367 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 GK3PQ14409 553 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 GRM2Q14416 872 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 NDUFAF5Q5TEU4 345 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 ZNF704Q6ZNC4 412 aaPredicted RBP9.09□□□□□ -0.96
CSMD1-202ENST00000400186 SYNPRQ8TBG9 265 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 NETO1Q8TDF5 533 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 RAB9BQ9NP90 201 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 HEBP1Q9NRV9 189 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 DNAJC15Q9Y5T4 150 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 ENPP4Q9Y6X5 453 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 KIF13BQ9NQT8 1826 aa9.09□□□□□ -0.96
CSMD1-202ENST00000400186 ITGB4P16144 1822 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 RAB3AP20336 220 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 GLO1Q04760 184 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 OR5D16Q8NGK9 328 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 ZNF578Q96N58 590 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-202ENST00000400186 KIF25Q9UIL4 384 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 PHIPQ8WWQ0 1821 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 SERPINA5P05154 406 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 ITGAMP11215 1152 aa9.08□□□□□ -0.96
CSMD1-202ENST00000400186 CTU1Q7Z7A3 348 aaKnown RBP9.08□□□□□ -0.96
CSMD1-202ENST00000400186 SNX18Q96RF0 628 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms